Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq15 426 5e-117 seq36 401 2e-109 >seq15 Length=534025 Score = 426 bits (472), Expect = 5e-117 Identities = 242/246 (98%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 503043 AGGGTCTTCTTTCCCCGCTTATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 502984 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 502983 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 502924 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 502923 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 502864 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 502863 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCAC 502804 Query 538 TTTCTG 543 |||||| Sbjct 502803 TTTCTG 502798 Score = 426 bits (472), Expect = 5e-117 Identities = 242/246 (98%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 514862 AGGGTCTTCTTTCCCCGCTTATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 514803 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514802 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 514743 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514742 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 514683 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 514682 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCAC 514623 Query 538 TTTCTG 543 |||||| Sbjct 514622 TTTCTG 514617 Score = 426 bits (472), Expect = 5e-117 Identities = 242/246 (98%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 526694 AGGGTCTTCTTTCCCCGCTTATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 526635 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 526634 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 526575 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 526574 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 526515 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 526514 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCAC 526455 Query 538 TTTCTG 543 |||||| Sbjct 526454 TTTCTG 526449 Score = 369 bits (408), Expect = 1e-99 Identities = 259/292 (89%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 503757 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATT 503698 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 503697 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 503638 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||| |||| || ||| || || |||| ||||| ||||||| Sbjct 503637 AGCCCGCGAAGGACCTTAATGCCAAAACGTGGGACGTTAATCCCAGCTCCGCCTCATTGA 503578 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 503577 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 503521 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||| ||||| | ||| |||||||| ||| |||||||||||||||||| Sbjct 503520 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 503470 Score = 369 bits (408), Expect = 1e-99 Identities = 259/292 (89%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 515577 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATT 515518 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 515517 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 515458 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||| |||| || ||| || || |||| ||||| ||||||| Sbjct 515457 AGCCCGCGAAGGACCTTAATGCCAAAACGTGGGACGTTAATCCCAGCTCCGCCTCATTGA 515398 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 515397 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 515341 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||| ||||| | ||| |||||||| ||| |||||||||||||||||| Sbjct 515340 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 515290 Score = 361 bits (400), Expect = 2e-97 Identities = 258/292 (88%), Gaps = 6/292 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 527405 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCC-TTAGGACACCTGCGTTATT 527347 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 527346 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 527287 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||| |||| || ||| || || |||| ||||| ||||||| Sbjct 527286 AGCCCGCGAAGGACCTTAATGCCAAAACGTGGGACGTTAATCCCAGCTCCGCCTCATTGA 527227 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 527226 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 527170 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||| ||||| | ||| |||||||| ||| |||||||||||||||||| Sbjct 527169 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 527119 >seq36 Length=474693 Score = 401 bits (444), Expect = 2e-109 Identities = 239/246 (97%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 557 AGGGTCTTCTTTCCC-GCTTATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 615 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 616 TAGTAGATAGG-ACAGTGGGAATCT-GTTAATCCATTCATGCGCGTCACTAATTAGATGA 673 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 674 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 733 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 734 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCAC 793 Query 538 TTTCTG 543 |||||| Sbjct 794 TTTCTG 799 Score = 154 bits (170), Expect = 5e-35 Identities = 114/130 (88%), Gaps = 5/130 (4%) Strand=Plus/Plus Query 169 CCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC 228 |||| ||||| ||||||| |||||||||||||||||| |||||||||||||||| |||| Sbjct 6 CCAGCTCCGCCTCATTGAATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGC 65 Query 229 CGAAACGGCTCCCACTTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGT 287 |||| |||||||||||||||||| ||||| | ||| |||||||| ||| |||||||| Sbjct 66 CGAA---GCTCCCACTTATTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGT 121 Query 288 CAAGCTCAAC 297 |||||||||| Sbjct 122 CAAGCTCAAC 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199394976