Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq15 140 5e-31 >seq15 Length=534025 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 504082 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 504139 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 504140 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 504199 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 504200 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 504253 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 515902 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 515959 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 515960 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 516019 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 516020 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 516073 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 527730 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 527787 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 527788 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 527847 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 527848 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 527901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199706368