Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq26 280 1e-70 >seq26 Length=1828681 Score = 280 bits (310), Expect = 1e-70 Identities = 776/1172 (66%), Gaps = 46/1172 (4%) Strand=Plus/Minus Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| ||||||| ||| ||| || || | |||||| |||||||| ||||| || |||| Sbjct 22013 TCGAACGGCATCGCCA--AGGCCATGAATGCGTCGGCGAGACCTTGCACTCCGATGCCGA 21956 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900 |||| || || || || ||||| | |||||| || |||||||| || | || | Sbjct 21955 TGGGGCGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGGTAGTAGTTAACGTCAA 21896 Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959 | ||||| ||||| ||| | || || | |||| ||| ||| | | ||| || Sbjct 21895 TGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGT-GCAGCTTCTTGAAGTC- 21838 Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019 || | | || || || || || || || || | | | || || Sbjct 21837 ----GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAACG-CGATCGAGGCC 21795 Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079 | ||||||||| || |||||| || |||| ||||||| |||||||||||||| || Sbjct 21794 AAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGCACAGGTT- 21736 Query 66080 CTGCAGCGT-ATGGTGCCCAAATTCTGTTGATTACTCTTGC--GATTGCATGCATCCTTG 66136 | | | | || ||||| | |||| ||| || | || | | |||| || |||||| Sbjct 21735 CGACGACTTGATCGTGCCAAGGTTCTTTTGGTT-CGATTTCTTGTTTGCG-GCGTCCTTG 21678 Query 66137 TACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA--- 66193 || | |||| |||| ||||||| || || |||| ||| | || |||| |||||| Sbjct 21677 TAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTACCAAAGCTTT 21618 Query 66194 -GCGCGTGCCT--TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250 ||||| | | || | | | | ||||| ||||| ||||| | ||| | ||| Sbjct 21617 TGCGCGGGGATCGTCTTCTTG-GCGCGGCCCT-CCTTT----TCGTATTTCTCGAACAGG 21564 Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310 ||| ||| || | |||||| || | || | | || || | ||| Sbjct 21563 GCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAACAGG 21504 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| || || | || || || ||| || ||||| || |||||||| || || Sbjct 21503 GGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGCAAAG 21444 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 |||||||| || || || ||||| ||||||| || ||||| | ||| ||||||||| Sbjct 21443 AAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCA 21384 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 |||| |||||| ||||| || || |||||||| ||||| | || ||| ||| |||| Sbjct 21383 AAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCA 21324 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 ||||||||||||||||| ||| ||||||| ||||||| | ||| || |||| ||||| Sbjct 21323 CCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTC 21264 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | ||| || |||||| ||||| || || || || || | ||| | ||| | Sbjct 21263 GAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAA 21204 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGC 66668 || ||||||||||| ||||| |||||| ||| | || | | || | | |||| Sbjct 21203 CCGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTGTCGTAGATGC 21146 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728 | || || || ||| |||| || || | ||| |||| || ||| || || | || | Sbjct 21145 CTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCG 21086 Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGT 66788 | |||| |||||| || || | ||||| |||||||| | |||||| |||| Sbjct 21085 TTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGT 21026 Query 66789 ACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGA 66848 ||| || | ||| || |||| | || || || |||| || ||||| || | Sbjct 21025 ACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCA 20966 Query 66849 GGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGG 66908 || ||| || |||||| | | | | | ||| | | || || ||||| || || | Sbjct 20965 TGTGTTGCGGTCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGCG 20906 Query 66909 TCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 |||||| |||||||| ||| ||||||| Sbjct 20905 TCTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 20874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567820721680