Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq45 257 1e-63 >seq45 Length=1063883 Score = 257 bits (284), Expect = 1e-63 Identities = 774/1173 (66%), Gaps = 48/1173 (4%) Strand=Plus/Minus Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| ||||||| ||| ||| || || | |||||| |||||||| ||||| || |||| Sbjct 40219 TCGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGA 40162 Query 65841 TGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGATATCG 65899 |||| || || || || ||||| ||| |||||| || |||||||| |||| || Sbjct 40161 TGGGGCGGTGGCGGAAGTTGGAGT-TCTGCGCCTCGATGACGGGGTAGTAGTTGACGTCA 40103 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC 65958 || ||||| ||||| ||| | || || | |||| ||| ||| | | ||| || Sbjct 40102 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGT-GCAGCTTCTTGAAGTC 40044 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018 || | | || || || || || || || || | | | || || Sbjct 40043 -----GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAAAG-CGATCGAGGC 40002 Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078 | |||||| || || |||||| || || | ||||||| ||||| ||||| || || Sbjct 40001 CAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTT 39942 Query 66079 ACTGCAGCGT-ATGGTGCCCAAATTCTGTTGATTAC-TCTTGCGATTGCATGCATCCTTG 66136 | | | | || ||||| | |||| ||| || | || | ||||| || |||||| Sbjct 39941 -CGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA-GCGTCCTTG 39884 Query 66137 TACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA--- 66193 || | |||| |||| ||||||| || || |||| || | || || | |||||| Sbjct 39883 TAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATACCAAAGCTTT 39824 Query 66194 -GCGCGTGCCT--TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250 ||||| | | || | | | | ||||| ||||| ||||| | ||| | | | Sbjct 39823 TGCGCGGGGATCGTCTTCTTG-GCGCGGCCCT-CCTTT----TCGTATTTCTCGAACAAG 39770 Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310 || ||| || | |||||| || | || | | || || | || Sbjct 39769 ACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGG 39710 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| || || | || ||||| ||| || ||||| || |||||||| || || Sbjct 39709 GGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGCAAAG 39650 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 |||||||| || || || ||||| ||||||| || ||||| | ||| |||||||| Sbjct 39649 AAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCG 39590 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 |||| |||||| ||||| || || |||||||| ||||| | || ||| ||| |||| Sbjct 39589 AAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCA 39530 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 ||||||||||||||||| ||| |||||| ||||||| | ||| || |||| ||||| Sbjct 39529 CCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTC 39470 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | |||||| |||||| ||||| ||| || || || || | ||| | ||| | Sbjct 39469 GAGTAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAA 39410 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGC 66668 || ||||||||||| ||||| |||||| ||| | || | | ||| | | |||| Sbjct 39409 CCGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGTGTGTCGTAGATGC 39352 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728 | ||||| || || |||| || || | ||| | || || || || || | || | Sbjct 39351 CTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCG 39292 Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGT 66788 | |||| |||||| || || | ||||| || ||||| | |||||| | |||| Sbjct 39291 TTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGT 39232 Query 66789 ACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGG 66847 ||| || | ||| || |||| | || || || |||| || ||| ||||| || Sbjct 39231 ACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACA-CGCATGAGC 39173 Query 66848 AGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGG 66907 | || || || |||||| | | | | | ||| | | ||||||||||| || || Sbjct 39172 ATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGC 39113 Query 66908 GTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 ||||||| |||||||| ||| ||||||| Sbjct 39112 GTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 39080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567336185680