Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq79 257 1e-63 >seq79 Length=1733205 Score = 257 bits (284), Expect = 1e-63 Identities = 774/1173 (66%), Gaps = 48/1173 (4%) Strand=Plus/Minus Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| ||||||| ||| ||| || || | |||||| |||||||| ||||| || |||| Sbjct 51426 TCGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGA 51369 Query 65841 TGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGATATCG 65899 |||| || || || || ||||| ||| |||||| || |||||||| |||| || Sbjct 51368 TGGGGCGGTGGCGGAAGTTGGAGT-TCTGCGCCTCGATGACGGGGTAGTAGTTGACGTCA 51310 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC 65958 || ||||| ||||| ||| | || || | |||| ||| ||| | | ||| || Sbjct 51309 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGT-GCAGCTTCTTGAAGTC 51251 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018 || | | || || || || || || || || | | | || || Sbjct 51250 -----GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAAAG-CGATCGAGGC 51209 Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078 | |||||| || || |||||| || || | ||||||| ||||| ||||| || || Sbjct 51208 CAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTT 51149 Query 66079 ACTGCAGCGT-ATGGTGCCCAAATTCTGTTGATTAC-TCTTGCGATTGCATGCATCCTTG 66136 | | | | || ||||| | |||| ||| || | || | ||||| || |||||| Sbjct 51148 -CGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA-GCGTCCTTG 51091 Query 66137 TACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA--- 66193 || | |||| |||| ||||||| || || |||| || | || || | |||||| Sbjct 51090 TAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATACCAAAGCTTT 51031 Query 66194 -GCGCGTGCCT--TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250 ||||| | | || | | | | ||||| ||||| ||||| | ||| | | | Sbjct 51030 TGCGCGGGGATCGTCTTCTTG-GCGCGGCCCT-CCTTT----TCGTATTTCTCGAACAAG 50977 Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310 || ||| || | |||||| || | || | | || || | || Sbjct 50976 ACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGG 50917 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| || || | || ||||| ||| || ||||| || |||||||| || || Sbjct 50916 GGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGCAAAG 50857 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 |||||||| || || || ||||| ||||||| || ||||| | ||| |||||||| Sbjct 50856 AAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCG 50797 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 |||| |||||| ||||| || || |||||||| ||||| | || ||| ||| |||| Sbjct 50796 AAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCA 50737 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 ||||||||||||||||| ||| |||||| ||||||| | ||| || |||| ||||| Sbjct 50736 CCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTC 50677 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | |||||| |||||| ||||| ||| || || || || | ||| | ||| | Sbjct 50676 GAGTAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAA 50617 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGC 66668 || ||||||||||| ||||| |||||| ||| | || | | ||| | | |||| Sbjct 50616 CCGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGTGTGTCGTAGATGC 50559 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728 | ||||| || || |||| || || | ||| | || || || || || | || | Sbjct 50558 CTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCG 50499 Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGT 66788 | |||| |||||| || || | ||||| || ||||| | |||||| | |||| Sbjct 50498 TTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGT 50439 Query 66789 ACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGG 66847 ||| || | ||| || |||| | || || || |||| || ||| ||||| || Sbjct 50438 ACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACA-CGCATGAGC 50380 Query 66848 AGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGG 66907 | || || || |||||| | | | | | ||| | | ||||||||||| || || Sbjct 50379 ATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGC 50320 Query 66908 GTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 ||||||| |||||||| ||| ||||||| Sbjct 50319 GTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 50287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567365257840