Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq162 73.4 4e-11 seq110 73.4 4e-11 seq85 73.4 4e-11 seq75 73.4 4e-11 seq56 73.4 4e-11 seq45 73.4 4e-11 >seq162 Length=28108 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 21213 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 21154 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 21153 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 21099 >seq110 Length=50150 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 14972 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 15031 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 15032 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 15086 >seq85 Length=75362 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 5952 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 5893 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 5892 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 5838 >seq75 Length=349689 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 125227 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 125286 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 125287 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 125341 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 192212 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 192271 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 192272 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 192326 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 249664 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 249723 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 249724 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 249778 >seq56 Length=175490 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 49269 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 49328 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 49329 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 49383 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 117459 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 117518 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 117519 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 117573 >seq45 Length=67623 Score = 73.4 bits (80), Expect = 4e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGA-AAAG 60 ||| |||| |||||||||||| || |||| |||||||||||||| | | ||| || | Sbjct 6094 GCACACGGAGGATGCCTAGGCGCTAGGAGCCGAAGAAGGACGTGGCGAACAACGATAAGG 6035 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 | |||||| | | | | |||||||| ||| ||||||||||| |||||| Sbjct 6034 CCTCGGGGAGCTGTAAGCAAGCTTTGATCCGGGGATGTCCGAATGGGGAAACCCG 5980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476799233246