Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq162 109 6e-22 seq110 109 6e-22 seq85 109 6e-22 seq75 109 6e-22 seq56 109 6e-22 seq45 109 6e-22 >seq162 Length=28108 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 19557 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 19499 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 19498 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 19439 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 19438 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 19379 Query 192 GCCAA 196 || || Sbjct 19378 GCGAA 19374 >seq110 Length=50150 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 16610 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 16668 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 16669 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 16728 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 16729 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 16788 Query 192 GCCAA 196 || || Sbjct 16789 GCGAA 16793 >seq85 Length=75362 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 4190 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 4132 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 4131 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 4072 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 4071 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 4012 Query 192 GCCAA 196 || || Sbjct 4011 GCGAA 4007 >seq75 Length=349689 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 126864 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 126922 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 126923 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 126982 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 126983 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 127042 Query 192 GCCAA 196 || || Sbjct 127043 GCGAA 127047 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 193849 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 193907 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 193908 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 193967 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 193968 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 194027 Query 192 GCCAA 196 || || Sbjct 194028 GCGAA 194032 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 251443 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 251501 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 251502 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 251561 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 251562 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 251621 Query 192 GCCAA 196 || || Sbjct 251622 GCGAA 251626 >seq56 Length=175490 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 50906 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 50964 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 50965 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 51024 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 51025 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 51084 Query 192 GCCAA 196 || || Sbjct 51085 GCGAA 51089 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 119096 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 119154 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 119155 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 119214 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 119215 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 119274 Query 192 GCCAA 196 || || Sbjct 119275 GCGAA 119279 >seq45 Length=67623 Score = 109 bits (120), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 4439 CGTAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 4381 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAAT 137 |||||||| |||||| |||||| |||||||||||| || |||| ||| || ||| Sbjct 4380 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCTCGGTAGGGTGAAT 4321 Query 138 GG---GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | ||||| ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 4320 AGCCCGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 4261 Query 192 GCCAA 196 || || Sbjct 4260 GCGAA 4256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531199145764