Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq162 120 3e-25 seq110 120 3e-25 seq85 120 3e-25 seq75 120 3e-25 seq56 120 3e-25 seq45 120 3e-25 >seq162 Length=28108 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 18748 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 18807 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 18808 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 18867 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 18868 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 18903 >seq110 Length=50150 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 17421 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 17362 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 17361 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 17302 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 17301 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 17266 >seq85 Length=75362 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 3381 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 3440 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 3441 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 3500 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 3501 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 3536 >seq75 Length=349689 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 127673 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 127614 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 127613 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 127554 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 127553 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 127518 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 194658 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 194599 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 194598 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 194539 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 194538 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 194503 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 252254 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 252195 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 252194 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 252135 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 252134 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 252099 >seq56 Length=175490 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 51715 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 51656 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 51655 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 51596 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 51595 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 51560 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 119907 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 119848 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 119847 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 119788 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 119787 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 119752 >seq45 Length=67623 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | ||||||||||||||| | || |||||| |||| Sbjct 3628 GTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 3687 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| ||| |||| ||||||| | | ||| || Sbjct 3688 CTCGACTTGTCAGTCTCGCAGTCAAGCTCCCTTTTGCCTTTGCACTCTTCGAATGATTTC 3747 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 3748 CAACCATTCTGAGGGAACCTTGGGGCGCCTCCGTTA 3783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473599238392