Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq53 370 3e-98 >seq53 Length=16508 Score = 370 bits (410), Expect = 3e-98 Identities = 563/799 (70%), Gaps = 2/799 (0%) Strand=Plus/Plus Query 37649 TTAATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAA 37708 ||||||||| |||||| || || |||||||| || | || | || || ||||||| Sbjct 10948 TTAATGAAAGCATATTTGGATTTACTGCAAGATATTCTCGATCATGGTGTGGAAAAAGGG 11007 Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || || ||||| |||| || || ||||||||||| ||||| | || Sbjct 11008 GACCGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATCG 11067 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 || || |||||||| || ||||| ||| | | ||| | ||| | || ||||||| Sbjct 11068 GAAGGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACTT 11127 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | || || ||||| ||| | |||| |||| |||||||| || | ||| Sbjct 11128 CTCTGGTTCCTTAAGGGAGATACCAACATATCCTATCTGCATGAGAATGGAGTTTCCATT 11187 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 |||||||| |||||||| || ||||| || || || ||| |||||||| | || |||||| Sbjct 11188 TGGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGGCTCCCAGTGGCGC 11247 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTT-GTCGAAGAGAT 38007 || ||| | | | ||||| | || |||||||| || || || || || | || Sbjct 11248 TCCTGGGAAGCGCCGGACGGCCGGAAGATTGACCAGATTGC-TGCTTTGGTAGACGGCAT 11306 Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067 || |||||| |||| ||||| | ||||| ||||| ||||||||||| || | || Sbjct 11307 TAAGAACAATCCGAATTCCCGCCGTCACCTGGTCAGCGCATGGAATGTAGCGGAGATCGA 11366 Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTT 38127 | |||||||| ||||| || |||| | ||||| |||||||| || |||| || Sbjct 11367 TAATATGAAGCTCCCGCCATGCCATTTTGTGTTTCAATTCTATGTGGCTGACGGTAAATT 11426 Query 38128 GTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGC 38187 ||| |||||| | | ||| || || ||||| || | || ||||||||||||| || Sbjct 11427 GTCCTGCATGCTGACGATGCGTTCTGTGGATACCTTCCTTGGACTGCCGTTTAACATTGC 11486 Query 38188 GAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACT 38247 || || ||||| ||||| |||||| | ||||| || ||||| |||| ||||| || | Sbjct 11487 AAGTTATGCGCTTTTGACCCATATGATTGCCCAGCAGTGCGATCTGGAAGTCGGGGAGTT 11546 Query 38248 CATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCA 38307 ||| | |||| || ||||| ||| | || || |||||||| || | || || Sbjct 11547 CATCTGGTCCGGAGGAGACGTGCATATCTATTCCAACCATCTGGAGCAGGTTAAGACCCA 11606 Query 38308 GCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTCTAT 38367 | || | | || || ||||||||| ||||||| | |||||||||||| || || Sbjct 11607 GTTGGCCAGAGAACCTTATCCGCTGCCGCAGCTTGTTATTAAACGGAAGCCGGATTCCAT 11666 Query 38368 CTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGATTAA 38427 ||||| || ||| || || || || | || ||| | | ||||||| ||||| Sbjct 11667 TTTTGATTACAAATTTGAGGATTTCGAGTTTGTGAACTATCAGCATCATCCGGGAATTAA 11726 Query 38428 AGCACCGGTGGCGGTTTAA 38446 ||| ||||| ||| ||||| Sbjct 11727 AGCGCCGGTAGCGATTTAA 11745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130639742475900