Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq53 370 3e-98
>seq53
Length=16508
Score = 370 bits (410), Expect = 3e-98
Identities = 563/799 (70%), Gaps = 2/799 (0%)
Strand=Plus/Plus
Query 37649 TTAATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAA 37708
||||||||| |||||| || || |||||||| || | || | || || |||||||
Sbjct 10948 TTAATGAAAGCATATTTGGATTTACTGCAAGATATTCTCGATCATGGTGTGGAAAAAGGG 11007
Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768
||||| || || ||||| |||| || || ||||||||||| ||||| | ||
Sbjct 11008 GACCGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATCG 11067
Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828
|| || |||||||| || ||||| ||| | | ||| | ||| | || |||||||
Sbjct 11068 GAAGGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACTT 11127
Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888
|| ||||| | || || ||||| ||| | |||| |||| |||||||| || | |||
Sbjct 11128 CTCTGGTTCCTTAAGGGAGATACCAACATATCCTATCTGCATGAGAATGGAGTTTCCATT 11187
Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948
|||||||| |||||||| || ||||| || || || ||| |||||||| | || ||||||
Sbjct 11188 TGGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGGCTCCCAGTGGCGC 11247
Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTT-GTCGAAGAGAT 38007
|| ||| | | | ||||| | || |||||||| || || || || || | ||
Sbjct 11248 TCCTGGGAAGCGCCGGACGGCCGGAAGATTGACCAGATTGC-TGCTTTGGTAGACGGCAT 11306
Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067
|| |||||| |||| ||||| | ||||| ||||| ||||||||||| || | ||
Sbjct 11307 TAAGAACAATCCGAATTCCCGCCGTCACCTGGTCAGCGCATGGAATGTAGCGGAGATCGA 11366
Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTT 38127
| |||||||| ||||| || |||| | ||||| |||||||| || |||| ||
Sbjct 11367 TAATATGAAGCTCCCGCCATGCCATTTTGTGTTTCAATTCTATGTGGCTGACGGTAAATT 11426
Query 38128 GTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGC 38187
||| |||||| | | ||| || || ||||| || | || ||||||||||||| ||
Sbjct 11427 GTCCTGCATGCTGACGATGCGTTCTGTGGATACCTTCCTTGGACTGCCGTTTAACATTGC 11486
Query 38188 GAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACT 38247
|| || ||||| ||||| |||||| | ||||| || ||||| |||| ||||| || |
Sbjct 11487 AAGTTATGCGCTTTTGACCCATATGATTGCCCAGCAGTGCGATCTGGAAGTCGGGGAGTT 11546
Query 38248 CATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCA 38307
||| | |||| || ||||| ||| | || || |||||||| || | || ||
Sbjct 11547 CATCTGGTCCGGAGGAGACGTGCATATCTATTCCAACCATCTGGAGCAGGTTAAGACCCA 11606
Query 38308 GCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTCTAT 38367
| || | | || || ||||||||| ||||||| | |||||||||||| || ||
Sbjct 11607 GTTGGCCAGAGAACCTTATCCGCTGCCGCAGCTTGTTATTAAACGGAAGCCGGATTCCAT 11666
Query 38368 CTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGATTAA 38427
||||| || ||| || || || || | || ||| | | ||||||| |||||
Sbjct 11667 TTTTGATTACAAATTTGAGGATTTCGAGTTTGTGAACTATCAGCATCATCCGGGAATTAA 11726
Query 38428 AGCACCGGTGGCGGTTTAA 38446
||| ||||| ||| |||||
Sbjct 11727 AGCGCCGGTAGCGATTTAA 11745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130639742475900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |