Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq75 607 3e-169
>seq75
Length=349689
Score = 607 bits (672), Expect = 3e-169
Identities = 948/1340 (71%), Gaps = 43/1340 (3%)
Strand=Plus/Plus
Query 1654 AAGGAGAGTATTGTAA-TGTCAATTATTACTGATGTCTACGCACGTGAAGTCCTTGACTC 1712
||||||| || | || || | |||||| |||| || |||||||| ||||||||||||||
Sbjct 298079 AAGGAGAATACTCAAAATGACTATTATTTCTGACGTATACGCACGCGAAGTCCTTGACTC 298138
Query 1713 ACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGTCGCGG 1772
||||| ||||| || ||||||| ||||||||| ||||| || || |||| ||||
Sbjct 298139 CCGCGGCAACCCGACTGTTGAAGTTGAAGTTTACCTGGAATCCGGCGCTATCGGCCGCGC 298198
Query 1773 TATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGATGGTGA 1832
||| || || || || || || || || | |||||||| || || ||||| || | ||
Sbjct 298199 TATCGTACCATCCGGTGCTTCCACAGGCGCTCACGAAGCTGTTGAGCTTCGCGACGAAGA 298258
Query 1833 CAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACAACGTTAT 1892
|||| | |||||| || ||| || ||||| || | |||||| ||| || | ||
Sbjct 298259 CAAATCCCGTTACCTGGGCAAAGGTGTTCTGAAAGCCGTAGCTAACGTTAACGACATCAT 298318
Query 1893 TGCTGAGCACATCATCGGATTCGACGTACGTGATCAACAAGGTATTGACCGCGCAATGAT 1952
||| | | ||||| | |||| | || |||| || || ||| |||||
Sbjct 298319 CGCTCCTGAAGTAATCGGCATGGACGCTCTGGACCAACTGGGCATCGACAAAATGATGAT 298378
Query 1953 CGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTATTCTTGGTGTGTC 2012
|||| | ||||| || || |||||||| ||||| ||||| ||||| || || | || ||
Sbjct 298379 CGCTTTGGACGGAACACCTAACAAAGGCAAACTGGGTGCTAACGCCATCCTGGCGGTTTC 298438
Query 2013 TATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAAGTTCCACTTTACAGCTACCTTGG 2072
|| |||||||| ||||| || || ||| | || | || | || ||||| ||
Sbjct 298439 CATGGCTGTAGCCCGCGCTGCAGCAGACGCTTTGGATCTGCCTTTGTATGTTTACCTCGG 298498
Query 2073 CGGATTCAACACTAAAGTTCTTCCAACTCCAATGATGAACATCATCAACGGTGGTTCTCA 2132
|||||||||| |||| | ||| ||| |||||||||||| | ||||| || | ||
Sbjct 298499 CGGATTCAACGCTAAGCAATTGCCAGTTCCTATGATGAACATCGTTAACGGCGGCGCACA 298558
Query 2133 CTCAGACGCTCCAA--TCGCTTTCCAAGAATTTATGATTGTACCTGCTGGTGCACCAACA 2190
| ||| ||| | | | |||||||| ||| | | |||| || || ||||
Sbjct 298559 TGCCGACAA--CAACGTTGACGTGCAAGAATTCATGGTACTCCCTGTAGGCGCTCCAAGC 298616
Query 2191 TTCAAAGAAGCGCTTCGTTGGGGTGCTGAAATCTTCCACGCGCTTAAGAAAATCCTTAAA 2250
|||||||||||||||||| ||| ||||||||||||||| || || |||| ||
Sbjct 298617 TTCAAAGAAGCGCTTCGTATGGGCGCTGAAATCTTCCACAACCTGAA----ATCCGTATT 298672
Query 2251 GAACGTGGA---CTTGAA-ACAGCCGTAGGTGACGAAGGTGGTTTCGCACCT--CGTTTC 2304
||| | | | |||| || || || ||||||||||| ||||| || ||| | || |
Sbjct 298673 GAAAGGCAAAGGCCTGAACACGGCAGTTGGTGACGAAGGCGGTTTTGCTCCTAACTTTAC 298732
Query 2305 GACGGAACTGAAGATGGTGTTGAAA-CTATCATCAAAGCTATCGAAGCTGCTGGATATGT 2363
| ||| ||||||| | |||| | |||||| |||| || || || || ||
Sbjct 298733 TTCC-AAC-GAAGATGCT-TTGACTTCGATCATCGAAGCGATTGAGAAAGCCGGCTACAC 298789
Query 2364 ACCAGGTAAAGACGTATTTATCGGACTTGACTGTGCATCATCTGAATTCTACGATGCAGA 2423
|||||| ||||||||||| | || | ||| ||| || | || |||||| | |||
Sbjct 298790 ACCAGGCAAAGACGTATTCCTGGGGATGGACGTTGCTTCCACGGAGTTCTACAA---AGA 298846
Query 2424 ACGTAAAGTTTACGACTACACTAAATTTGAAGGTGAAGGCGCTGCTGTTCGTACTGCTGC 2483
| ||| ||| || | ||||| |||||| | ||| ||| ||||
Sbjct 298847 CGGCAAA---TACCACC---------TGGAAGGCGAAGGCAAATCC-TTC--ACTTCTGC 298891
Query 2484 AGAACAAATCGACTACCTTGAAGAATTGGTTAACAAATACCCAATCATCACTATCGAAGA 2543
|| | ||| || | | ||| ||||||||||||||||||| ||||||||
Sbjct 298892 TGAGTTCGTTGACCTGCTCGCTTCTTGGGTAGACAAATACCCAATCATCACCATCGAAGA 298951
Query 2544 TGGTATGGACGAAAACGACTGGGACGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAA 2603
|| |||| |||||||||| || ||||| ||| ||||| | || ||
Sbjct 298952 CGGCTGCTCCGAAGACGACTGGGAAGGCTGGAAGCTTCTGACTGAGAAATTGGGCAACAA 299011
Query 2604 AGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAACACTGCTTACCTTGAAAAAGGTAT 2663
| | |||||||||||||||||| | |||||||| ||||||| || | ||||||||
Sbjct 299012 AATCCAATTGGTTGGTGACGACCTGTTCGTAACGAACACTGAGCGTCTGGCTAAAGGTAT 299071
Query 2664 TGCAGAACACGCT---GCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGAC 2720
||| ||| | | |||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 299072 ---CGAAGACGGTATCGGTAACTCCATCCTGATCAAAGTAAACCAAATCGGTACTTTGAC 299128
Query 2721 TGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACA 2780
||||||||| |||||||| |||||||| ||| ||||| |||||||| || | || ||
Sbjct 299129 TGAAACTTTCGACGCTATTGAAATGGCTAAACGCGCTGGTTACACAGCTGTTATCTCTCA 299188
Query 2781 CCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGG 2840
|||||| ||||| ||||||| |||||||| || || || |||||||| ||||||||
Sbjct 299189 CCGTTCCGGTGAGTCTGAAGACAGCACAATCGCCGACATCGCGGTTGCAACAAACGCTGG 299248
Query 2841 TCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCT 2900
||||| || |||||| | || ||||| |||||||| || |||||||||||||||||
Sbjct 299249 CCAAATCAAAACAGGTGCTCCTTCCCGTACAGACCGTATCGCAAAATACAACCAATTGCT 299308
Query 2901 TCGTATCGAAGACCAACTTGGTGAAGTTGCAGAATACCGTGGTTTGAAATCATTCTACAA 2960
||| |||||||||||| | || ||| |||| ||||| || |||| ||| ||||||||
Sbjct 299309 TCGCATCGAAGACCAATTGGGCGAACTTGCTCAATACAACGGCTTGACATCTTTCTACAA 299368
Query 2961 CTTGAAAAAATAAAACGTTT 2980
| |||| |||||| | ||||
Sbjct 299369 CCTGAAGAAATAAGAAGTTT 299388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156038092409304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |