Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq75 607 3e-169 >seq75 Length=349689 Score = 607 bits (672), Expect = 3e-169 Identities = 948/1340 (71%), Gaps = 43/1340 (3%) Strand=Plus/Plus Query 1654 AAGGAGAGTATTGTAA-TGTCAATTATTACTGATGTCTACGCACGTGAAGTCCTTGACTC 1712 ||||||| || | || || | |||||| |||| || |||||||| |||||||||||||| Sbjct 298079 AAGGAGAATACTCAAAATGACTATTATTTCTGACGTATACGCACGCGAAGTCCTTGACTC 298138 Query 1713 ACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGTCGCGG 1772 ||||| ||||| || ||||||| ||||||||| ||||| || || |||| |||| Sbjct 298139 CCGCGGCAACCCGACTGTTGAAGTTGAAGTTTACCTGGAATCCGGCGCTATCGGCCGCGC 298198 Query 1773 TATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGATGGTGA 1832 ||| || || || || || || || || | |||||||| || || ||||| || | || Sbjct 298199 TATCGTACCATCCGGTGCTTCCACAGGCGCTCACGAAGCTGTTGAGCTTCGCGACGAAGA 298258 Query 1833 CAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACAACGTTAT 1892 |||| | |||||| || ||| || ||||| || | |||||| ||| || | || Sbjct 298259 CAAATCCCGTTACCTGGGCAAAGGTGTTCTGAAAGCCGTAGCTAACGTTAACGACATCAT 298318 Query 1893 TGCTGAGCACATCATCGGATTCGACGTACGTGATCAACAAGGTATTGACCGCGCAATGAT 1952 ||| | | ||||| | |||| | || |||| || || ||| ||||| Sbjct 298319 CGCTCCTGAAGTAATCGGCATGGACGCTCTGGACCAACTGGGCATCGACAAAATGATGAT 298378 Query 1953 CGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTATTCTTGGTGTGTC 2012 |||| | ||||| || || |||||||| ||||| ||||| ||||| || || | || || Sbjct 298379 CGCTTTGGACGGAACACCTAACAAAGGCAAACTGGGTGCTAACGCCATCCTGGCGGTTTC 298438 Query 2013 TATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAAGTTCCACTTTACAGCTACCTTGG 2072 || |||||||| ||||| || || ||| | || | || | || ||||| || Sbjct 298439 CATGGCTGTAGCCCGCGCTGCAGCAGACGCTTTGGATCTGCCTTTGTATGTTTACCTCGG 298498 Query 2073 CGGATTCAACACTAAAGTTCTTCCAACTCCAATGATGAACATCATCAACGGTGGTTCTCA 2132 |||||||||| |||| | ||| ||| |||||||||||| | ||||| || | || Sbjct 298499 CGGATTCAACGCTAAGCAATTGCCAGTTCCTATGATGAACATCGTTAACGGCGGCGCACA 298558 Query 2133 CTCAGACGCTCCAA--TCGCTTTCCAAGAATTTATGATTGTACCTGCTGGTGCACCAACA 2190 | ||| ||| | | | |||||||| ||| | | |||| || || |||| Sbjct 298559 TGCCGACAA--CAACGTTGACGTGCAAGAATTCATGGTACTCCCTGTAGGCGCTCCAAGC 298616 Query 2191 TTCAAAGAAGCGCTTCGTTGGGGTGCTGAAATCTTCCACGCGCTTAAGAAAATCCTTAAA 2250 |||||||||||||||||| ||| ||||||||||||||| || || |||| || Sbjct 298617 TTCAAAGAAGCGCTTCGTATGGGCGCTGAAATCTTCCACAACCTGAA----ATCCGTATT 298672 Query 2251 GAACGTGGA---CTTGAA-ACAGCCGTAGGTGACGAAGGTGGTTTCGCACCT--CGTTTC 2304 ||| | | | |||| || || || ||||||||||| ||||| || ||| | || | Sbjct 298673 GAAAGGCAAAGGCCTGAACACGGCAGTTGGTGACGAAGGCGGTTTTGCTCCTAACTTTAC 298732 Query 2305 GACGGAACTGAAGATGGTGTTGAAA-CTATCATCAAAGCTATCGAAGCTGCTGGATATGT 2363 | ||| ||||||| | |||| | |||||| |||| || || || || || Sbjct 298733 TTCC-AAC-GAAGATGCT-TTGACTTCGATCATCGAAGCGATTGAGAAAGCCGGCTACAC 298789 Query 2364 ACCAGGTAAAGACGTATTTATCGGACTTGACTGTGCATCATCTGAATTCTACGATGCAGA 2423 |||||| ||||||||||| | || | ||| ||| || | || |||||| | ||| Sbjct 298790 ACCAGGCAAAGACGTATTCCTGGGGATGGACGTTGCTTCCACGGAGTTCTACAA---AGA 298846 Query 2424 ACGTAAAGTTTACGACTACACTAAATTTGAAGGTGAAGGCGCTGCTGTTCGTACTGCTGC 2483 | ||| ||| || | ||||| |||||| | ||| ||| |||| Sbjct 298847 CGGCAAA---TACCACC---------TGGAAGGCGAAGGCAAATCC-TTC--ACTTCTGC 298891 Query 2484 AGAACAAATCGACTACCTTGAAGAATTGGTTAACAAATACCCAATCATCACTATCGAAGA 2543 || | ||| || | | ||| ||||||||||||||||||| |||||||| Sbjct 298892 TGAGTTCGTTGACCTGCTCGCTTCTTGGGTAGACAAATACCCAATCATCACCATCGAAGA 298951 Query 2544 TGGTATGGACGAAAACGACTGGGACGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAA 2603 || |||| |||||||||| || ||||| ||| ||||| | || || Sbjct 298952 CGGCTGCTCCGAAGACGACTGGGAAGGCTGGAAGCTTCTGACTGAGAAATTGGGCAACAA 299011 Query 2604 AGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAACACTGCTTACCTTGAAAAAGGTAT 2663 | | |||||||||||||||||| | |||||||| ||||||| || | |||||||| Sbjct 299012 AATCCAATTGGTTGGTGACGACCTGTTCGTAACGAACACTGAGCGTCTGGCTAAAGGTAT 299071 Query 2664 TGCAGAACACGCT---GCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGAC 2720 ||| ||| | | |||||| ||||| |||||||| |||||||||||||||||||| Sbjct 299072 ---CGAAGACGGTATCGGTAACTCCATCCTGATCAAAGTAAACCAAATCGGTACTTTGAC 299128 Query 2721 TGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACA 2780 ||||||||| |||||||| |||||||| ||| ||||| |||||||| || | || || Sbjct 299129 TGAAACTTTCGACGCTATTGAAATGGCTAAACGCGCTGGTTACACAGCTGTTATCTCTCA 299188 Query 2781 CCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGG 2840 |||||| ||||| ||||||| |||||||| || || || |||||||| |||||||| Sbjct 299189 CCGTTCCGGTGAGTCTGAAGACAGCACAATCGCCGACATCGCGGTTGCAACAAACGCTGG 299248 Query 2841 TCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCT 2900 ||||| || |||||| | || ||||| |||||||| || ||||||||||||||||| Sbjct 299249 CCAAATCAAAACAGGTGCTCCTTCCCGTACAGACCGTATCGCAAAATACAACCAATTGCT 299308 Query 2901 TCGTATCGAAGACCAACTTGGTGAAGTTGCAGAATACCGTGGTTTGAAATCATTCTACAA 2960 ||| |||||||||||| | || ||| |||| ||||| || |||| ||| |||||||| Sbjct 299309 TCGCATCGAAGACCAATTGGGCGAACTTGCTCAATACAACGGCTTGACATCTTTCTACAA 299368 Query 2961 CTTGAAAAAATAAAACGTTT 2980 | |||| |||||| | |||| Sbjct 299369 CCTGAAGAAATAAGAAGTTT 299388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156038092409304