Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq53 118 2e-21 >seq53 Length=16508 Score = 118 bits (130), Expect = 2e-21 Identities = 177/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 196115 GACAAAGCTGACCGTACCGGCACAGGCACTACGTCC-TATCTCGGCGCACAGATGCGCTT 196173 || |||| ||||| || || |||||||| |||| ||| | | ||| ||| | ||||| Sbjct 10999 GAAAAAGGGGACCGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGC-CAGCTTCGCTT 11057 Query 196174 CGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCAT 196233 ||||| || || || |||||||| || || || | | |||||| ||| | | Sbjct 11058 TGATCTATCGGAAGGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGT 11117 Query 196234 TCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGG 196293 ||||||||| || |||||||| || || || |||||||| || ||| |||| || || Sbjct 11118 TCATGAACTTCTCTGGTTCCTTAAGGGAGATACCAACATATCCTATCTGCATGAGAATGG 11177 Query 196294 TGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAA 196353 || || || ||| | || |||||| | || |||| | || || ||||||||||| Sbjct 11178 AGTTTCCATTTGGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGGCTC 11237 Query 196354 GCAGTGGCG 196362 |||||||| Sbjct 11238 CCAGTGGCG 11246 Score = 105 bits (116), Expect = 1e-17 Identities = 206/302 (68%), Gaps = 2/302 (1%) Strand=Plus/Plus Query 196798 GCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCGTCTTACGCATTGCTGAT 196857 |||| || ||||| ||||| || | ||||| ||||| || ||| || | ||| Sbjct 11445 GCGTTCTGTGGATACCTTCCTTGGACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGAC 11504 Query 196858 TCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTCGTTTGGACTGGCGGTGA 196917 || ||| | || || ||| | ||| | || |||||| | ||| | || || || Sbjct 11505 CCATATGATTGCCCAGCAGTGCGATCTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGA 11564 Query 196918 CGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAAC-AGCTGTCTCGTAAACCGA 196976 ||| || ||||| ||||| || |||| ||||| |||| | || || | | |||| Sbjct 11565 CGTGCATATCTATTCCAACCATCTGGAGCAGGTT-AAGACCCAGTTGGCCAGAGAACCTT 11623 Query 196977 AAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTATCTTCGATTACAAATTCG 197036 | || ||||| ||| ||||| ||||| || ||||| || || ||||||||||| | Sbjct 11624 ATCCGCTGCCGCAGCTTGTTATTAAACGGAAGCCGGATTCCATTTTTGATTACAAATTTG 11683 Query 197037 AAGACTTCGAACTGGTAGGCTACGATCCGCATCCGGCGATTAAAGCCCCGGTGGCTATTT 197096 | || ||||| | || ||| | | ||||||| |||||||| ||||| || |||| Sbjct 11684 AGGATTTCGAGTTTGTGAACTATCAGCATCATCCGGGAATTAAAGCGCCGGTAGCGATTT 11743 Query 197097 AA 197098 || Sbjct 11744 AA 11745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771540799049520