Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq54 268 7e-67 >seq54 Length=1353381 Score = 268 bits (296), Expect = 7e-67 Identities = 778/1176 (66%), Gaps = 54/1176 (5%) Strand=Plus/Minus Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| ||||||| ||| ||| || || | |||||| |||||||| ||||| || |||| Sbjct 18323 TCGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGA 18266 Query 65841 TGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGATATCG 65899 |||| || || || |||||||| ||| |||||| ||||| |||||||||| ||| Sbjct 18265 TGGGGCGGTGGCGGAAATTGGAGT-TCTGCGCCTCGATGACAGGATAGTAATTGACGTCG 18207 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC 65958 || ||||| ||||| ||| | || || | |||| ||| |||| | || || || Sbjct 18206 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGT-GCAACTTTTTAAAGTC 18148 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018 || | | || || || || || || || || | | | || || Sbjct 18147 -----GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAACG-CGATCGAGGC 18106 Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078 | ||||||||| || |||||| || || | ||||||| || |||||||||| || Sbjct 18105 CAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGCACAAGTT 18046 Query 66079 ACTGCAGCGT-ATGGTGCCCAAATTCTGTTGATTAC---TCTTGCGATTGCATGCATCCT 66134 | | | | || || || | |||| ||| || ||||| | || || |||| Sbjct 18045 -CGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGT--TCGCG-GCGTCCT 17990 Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA- 66193 |||| | |||| | || |||| || || || |||| ||| | || |||| |||||| Sbjct 17989 TGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCT 17930 Query 66194 ---GCGCGTG---CCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAG 66247 ||||| | | || | || | ||||| ||||| ||||| | ||| | Sbjct 17929 TTTGCGCGGGGATCGTTTTCTTGGCG--CGGCCCT-CCTTT----TCGTATTTCTCGAAC 17877 Query 66248 AGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATC 66307 | | ||| ||| || | |||||| || | || | | || || | Sbjct 17876 AAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAG 17817 Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367 || | ||| || || | || ||||| ||| || ||||| || |||||||| || Sbjct 17816 AGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCA 17757 Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427 |||||||||| || || || ||||| |||||||||| ||||| | ||| |||||| Sbjct 17756 AAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAAC 17697 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 ||||||| ||| || ||||| || || |||||||| ||||| | || ||| ||| | Sbjct 17696 TCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 17637 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 |||||||||||||||||||| || |||||| ||||||| | ||| || |||| ||| Sbjct 17636 CCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCG 17577 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTC 66607 || || | ||| || |||||| ||||| ||| || ||| || || | ||| | || Sbjct 17576 TTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTC 17517 Query 66608 AGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATA 66665 | ||| ||||||||||| ||||| |||||| ||| | || | | || | | | Sbjct 17516 AAACCGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTGTCGTAAA 17459 Query 66666 TGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGG 66725 |||| ||||| || ||| |||| || || | ||| | || || ||| || || | | Sbjct 17458 TGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAG 17399 Query 66726 GTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAAT 66785 | || |||| |||||| || || | ||||| |||||||| | |||||| | Sbjct 17398 GCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGT 17339 Query 66786 TGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATC 66844 |||| | || | ||| ||||||| | || || || |||| || ||| ||||| Sbjct 17338 TGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACA-CGCATG 17280 Query 66845 AGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCC 66904 || | || || || |||||| | | | | | ||| | | ||||||||||| || Sbjct 17279 AGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCG 17220 Query 66905 AGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || || |||| |||||||| ||| ||||||| Sbjct 17219 AGCGTTTTGAAGCCAAAGTAATTGTAGCCGAAATCG 17184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567215051680