Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12-
23] 162 sequences; 35,135,563 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq54 268 7e-67
>seq54
Length=1353381
Score = 268 bits (296), Expect = 7e-67
Identities = 778/1176 (66%), Gaps = 54/1176 (5%)
Strand=Plus/Minus
Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
||| ||||||| ||| ||| || || | |||||| |||||||| ||||| || ||||
Sbjct 18323 TCGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGA 18266
Query 65841 TGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGATATCG 65899
|||| || || || |||||||| ||| |||||| ||||| |||||||||| |||
Sbjct 18265 TGGGGCGGTGGCGGAAATTGGAGT-TCTGCGCCTCGATGACAGGATAGTAATTGACGTCG 18207
Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC 65958
|| ||||| ||||| ||| | || || | |||| ||| |||| | || || ||
Sbjct 18206 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGT-GCAACTTTTTAAAGTC 18148
Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018
|| | | || || || || || || || || | | | || ||
Sbjct 18147 -----GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAACG-CGATCGAGGC 18106
Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078
| ||||||||| || |||||| || || | ||||||| || |||||||||| ||
Sbjct 18105 CAAGTTGCAGACGGCGCACTCGTCCGGTGCCGAGTACTCGATGATCTCGGTGCACAAGTT 18046
Query 66079 ACTGCAGCGT-ATGGTGCCCAAATTCTGTTGATTAC---TCTTGCGATTGCATGCATCCT 66134
| | | | || || || | |||| ||| || ||||| | || || ||||
Sbjct 18045 -CGACGACTTGATCGTCCCAAGGTTCTTTTGGTTTGATTTCTTGT--TCGCG-GCGTCCT 17990
Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA- 66193
|||| | |||| | || |||| || || || |||| ||| | || |||| ||||||
Sbjct 17989 TGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCT 17930
Query 66194 ---GCGCGTG---CCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAG 66247
||||| | | || | || | ||||| ||||| ||||| | ||| |
Sbjct 17929 TTTGCGCGGGGATCGTTTTCTTGGCG--CGGCCCT-CCTTT----TCGTATTTCTCGAAC 17877
Query 66248 AGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATC 66307
| | ||| ||| || | |||||| || | || | | || || |
Sbjct 17876 AAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAG 17817
Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367
|| | ||| || || | || ||||| ||| || ||||| || |||||||| ||
Sbjct 17816 AGAGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCA 17757
Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427
|||||||||| || || || ||||| |||||||||| ||||| | ||| ||||||
Sbjct 17756 AAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAAC 17697
Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487
||||||| ||| || ||||| || || |||||||| ||||| | || ||| ||| |
Sbjct 17696 TCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 17637
Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547
|||||||||||||||||||| || |||||| ||||||| | ||| || |||| |||
Sbjct 17636 CCACCTTGGTCGACGTAGCGCGCCGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCG 17577
Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTC 66607
|| || | ||| || |||||| ||||| ||| || ||| || || | ||| | ||
Sbjct 17576 TTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTTGCGCGGATGTTGTGGATGCTC 17517
Query 66608 AGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATA 66665
| ||| ||||||||||| ||||| |||||| ||| | || | | || | | |
Sbjct 17516 AAACCGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTGTCGTAAA 17459
Query 66666 TGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGG 66725
|||| ||||| || ||| |||| || || | ||| | || || ||| || || | |
Sbjct 17458 TGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAG 17399
Query 66726 GTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAAT 66785
| || |||| |||||| || || | ||||| |||||||| | |||||| |
Sbjct 17398 GCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGT 17339
Query 66786 TGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATC 66844
|||| | || | ||| ||||||| | || || || |||| || ||| |||||
Sbjct 17338 TGTAAGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACA-CGCATG 17280
Query 66845 AGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCC 66904
|| | || || || |||||| | | | | | ||| | | ||||||||||| ||
Sbjct 17279 AGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCG 17220
Query 66905 AGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940
|| || |||| |||||||| ||| |||||||
Sbjct 17219 AGCGTTTTGAAGCCAAAGTAATTGTAGCCGAAATCG 17184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567215051680
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