Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015435.1_202016-12- 23] 162 sequences; 35,135,563 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq71 89.7 7e-13 >seq71 Length=189300 Score = 89.7 bits (98), Expect = 7e-13 Identities = 228/340 (67%), Gaps = 8/340 (2%) Strand=Plus/Minus Query 162526 TATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAAACTAC 162585 || || || || ||||| ||||| || || | || | |||||||| |||| |||||| Sbjct 139339 TACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATTGTCAAGAACTAC 139280 Query 162586 AGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGC 162645 | || || | ||| | || | | |||||| | ||||| ||||| | | || Sbjct 139279 CGCGAGGCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCACGAGTCCCCGCGT 139220 Query 162646 AGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTC-CCGAATTAGTG-TGG 162703 | || || || ||||| | |||||| |||||| |||| |||| | | | | Sbjct 139219 CGTGGTCGCACCTTTGTCACGAGGAAGATCTCCCGAGC--TGTCGCCGAGATCTCGCTCG 139162 Query 162704 GACTCCAA-AGTGA-TCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACACGC 162761 | | || | || ||||| || || || | | ||| ||||| ||||||||||| Sbjct 139161 GTCAACAGGACTGCCTCTAC--CTCGGCAATATGGAGGCCAAGCGTGATTGGGGACACGC 139104 Query 162762 CAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGT 162821 | |||||||| |||| ||||||| |||| | |||||||| ||||| || || | ||| Sbjct 139103 CGCCGACTACGTCGAGGGTATGTGGAGGATGATGCAGCAAGACAAGCCCGACGACTTTGT 139044 Query 162822 GATCGCAACTGGTGAGCAGTATTCTGTAAAGGACTTTGTT 162861 |||| || |||||| | |||| ||||| || ||| Sbjct 139043 CCTCGCGACGGGTGAGACCCACCCTGTCAAGGAGTTCGTT 139004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691457799795120