Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq28 250 2e-61 >seq28 Length=749551 Score = 250 bits (276), Expect = 2e-61 Identities = 776/1176 (66%), Gaps = 54/1176 (5%) Strand=Plus/Minus Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| ||||||| ||| ||| || || | |||||| |||||||| ||||| || |||| Sbjct 4477 TCGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCTAGACCTTGCACTCCGATGCCGA 4420 Query 65841 TGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGATATCG 65899 |||| || ||||| || ||||| ||| |||||| || || ||||| |||| ||| Sbjct 4419 TGGGGCGGTGACGGAAGTTGGAGT-TCTGCGCCTCGATGACGGGATAGTAGTTGACGTCG 4361 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC 65958 || ||||| ||||| ||| | || || | |||| ||| |||| | | || || Sbjct 4360 ATGATGCGGTTCAAGTTGAAAGCGACAACCTTGACGACCTCGT-GCAACTTCTTAAAGTC 4302 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018 || | | || || || || || || || || | | | || || Sbjct 4301 -----GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAACG-CGATCGAGGC 4260 Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078 | ||||||||| || |||||| || || | ||||||| || |||||||||| ||| Sbjct 4259 CAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAAATT 4200 Query 66079 ACTGCAGCGT-ATGGTGCCCAAATTCTGTTGATTACTCTTGC--GATTGCATGCATCCTT 66135 | | | | || ||||| | |||| ||| || | || | | |||| || ||||| Sbjct 4199 -CGACGACTTGATCGTGCCAAGGTTCTTTTGGTT-CGATTTCTTGTTTGCG-GCGTCCTT 4143 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA-- 66193 ||| | |||| | || |||| || || || |||| ||| | || |||| |||||| Sbjct 4142 GTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTT 4083 Query 66194 --GCGCGTGCCTTCACCGTACGTACCGC--CCTACCTTTGCGTTCGTAATGTTCGTAGAG 66249 ||||| | | | | | | ||| || ||||| ||||| | ||| | | Sbjct 4082 TTGCGCGGGGATCGTC--TTCTTGGCGCGACCCTCCTTT----TCGTATTTCTCGAACAA 4029 Query 66250 GTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAG 66309 | | ||| ||| || | |||||| |||| || | | || || | || Sbjct 4028 GGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAAGAG 3969 Query 66310 CGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTA 66369 | ||| || || | || ||||| ||| || ||||| || |||||||| || | Sbjct 3968 GGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAA 3909 Query 66370 GAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTC 66429 |||||||| || || || ||||| ||||||| || ||||| | ||| |||||||| Sbjct 3908 AAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTC 3849 Query 66430 AAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCC 66489 |||| ||| || ||||| || || |||||||| ||||| | || ||| ||| ||| Sbjct 3848 GAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCC 3789 Query 66490 ACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTT 66549 |||||||||||||||||| ||| || ||| ||||||| | ||| || |||| ||||| Sbjct 3788 ACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTT 3729 Query 66550 AGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAG 66609 || | ||| || |||||| | ||| ||| || || || || | ||| | ||| Sbjct 3728 CGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAA 3669 Query 66610 ACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATG 66667 ||| ||||||||||| ||||| |||||| ||| || || | | || | | ||| Sbjct 3668 ACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCA--CGTCTTGAGCGTGTCGTAGATG 3611 Query 66668 CCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGT 66727 || || || || ||| |||| || || | | | | || || ||| || || | || Sbjct 3610 CCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGC 3551 Query 66728 GTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTG 66787 || |||| |||||| || || | ||||| |||||||| | |||||| ||| Sbjct 3550 GTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTG 3491 Query 66788 TACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAG 66846 |||| || | ||| || |||| | || ||||| |||| || ||| ||||| || Sbjct 3490 TACGACTGCAAGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACA-CGCATGAG 3432 Query 66847 GAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC--ATTAAGTAGGAGCGTTCC 66904 | || || || |||||| | | || || | | |||| | ||||||||||| || Sbjct 3431 CATGTGCTGCGGGCGTTCGGCGA-CCTTGCCGTCA-ATGCGAAGCAAGTAGGAGCGCTCG 3374 Query 66905 AGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || || |||| |||||||| ||| ||||||| Sbjct 3373 AGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 3338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567704433040