Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq88 235 4e-57 >seq88 Length=4649774 Score = 235 bits (260), Expect = 4e-57 Identities = 412/598 (69%), Gaps = 4/598 (1%) Strand=Plus/Minus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| |||||| ||||| || |||||||| || |||||||||| || || || Sbjct 2234877 TCGACACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGG 2234818 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||||| ||||||| || ||||| | ||| |||||||| |||| ||| || ||||| Sbjct 2234817 ACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCAC 2234758 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 ||||| |||||||| ||||| | || ||| ||| ||||||||||||||||||||| Sbjct 2234757 GGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCTTGTTGCCACCTTGGTCGACGTAGCGC 2234698 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 ||| |||||| ||||||| | ||| || |||| ||||| || | ||| || || ||| Sbjct 2234697 GCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTACCG 2234638 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 ||||| ||| || || || || | |||| ||| ||| ||||| ||||| ||| Sbjct 2234637 GCGATGTAGGAGCCGGTCGCGCGGATGTTATGAATGCTCAAACCGATACCGCCGGCGGTC 2234578 Query 66629 TTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || || ||| ||| || || | | || | | ||||| ||||| || || ||| Sbjct 2234577 TTGGAAATG--AGCGCACACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCT 2234520 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || || | ||| | || || ||| || || | || || |||| |||||| | Sbjct 2234519 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 2234460 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||||| |||||||| | |||||| ||||||| || | ||| | Sbjct 2234459 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCT 2234400 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866 | |||| | || || || |||| || ||||| || | || || || |||||| Sbjct 2234399 CGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGCGGTCGTTCGG 2234340 Query 66867 CCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | | | | | ||| | | ||||||||||| || || || |||| |||||||| Sbjct 2234339 CGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTA 2234282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567244123840