Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq119 250 2e-61 >seq119 Length=1057158 Score = 250 bits (276), Expect = 2e-61 Identities = 428/615 (70%), Gaps = 6/615 (1%) Strand=Plus/Minus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| |||||| ||||| || |||||||| || |||||||||| || || || Sbjct 672824 TCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGG 672765 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||||| ||||||| || ||||| | ||| |||||||| |||||||| || ||||| Sbjct 672764 ACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGATGTCAGCGTGCCAC 672705 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || || |||||||| ||||| | || ||| ||| ||||||||||||||||||||| Sbjct 672704 GGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGC 672645 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 ||| |||||| ||||||| | ||| || |||| ||||| || | ||| || || ||| Sbjct 672644 GCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGAGTAGCCGTTCGTACCG 672585 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 ||||| ||| || || || || | ||||| ||| ||| ||||||||||| ||| Sbjct 672584 GCGATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACCGATACCACCGGCGGTC 672525 Query 66629 TTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || || ||| || ||| || | |||| | | ||||| ||||| || || ||| Sbjct 672524 TTGGAAATGAGCGCGCAAGTCTTGAGCGTGTC--GTAGATGCCTTCAATCGAATCGTCCT 672467 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || || | ||| | || || ||| || || | || || |||| ||||| | Sbjct 672466 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTAAAGAGCG 672407 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||||| |||||||| | |||||| ||||||| ||| | ||| | Sbjct 672406 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTCCAAGACGCGCT 672347 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865 | |||| | || || || |||| || ||| ||||| || | || || || |||||| Sbjct 672346 CGATGTCGTGACCGTGGATGCCGATGGCGACA-CGCATGAGCATGTGCTGCGGGCGTTCG 672288 Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925 | | | | | ||| | | ||||||||||| || || || |||| |||||||| Sbjct 672287 GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAG 672228 Query 66926 GAGTAATTGAAATCG 66940 |||| |||||| Sbjct 672227 TTGTAACCAAAATCG 672213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566909794000