Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq25 280 1e-70 >seq25 Length=1823320 Score = 280 bits (310), Expect = 1e-70 Identities = 776/1172 (66%), Gaps = 46/1172 (4%) Strand=Plus/Minus Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| ||||||| ||| ||| || || | |||||| |||||||| ||||| || |||| Sbjct 22003 TCGAACGGCATCGCCA--AGGCCATGAATGCGTCGGCGAGACCTTGCACTCCGATGCCGA 21946 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900 |||| || || || || ||||| | |||||| || |||||||| || | || | Sbjct 21945 TGGGGCGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGGTAGTAGTTAACGTCAA 21886 Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959 | ||||| ||||| ||| | || || | |||| ||| ||| | | ||| || Sbjct 21885 TGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGT-GCAGCTTCTTGAAGTC- 21828 Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019 || | | || || || || || || || || | | | || || Sbjct 21827 ----GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAACG-CGATCGAGGCC 21785 Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079 | ||||||||| || |||||| || |||| ||||||| |||||||||||||| || Sbjct 21784 AAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGCACAGGTT- 21726 Query 66080 CTGCAGCGT-ATGGTGCCCAAATTCTGTTGATTACTCTTGC--GATTGCATGCATCCTTG 66136 | | | | || ||||| | |||| ||| || | || | | |||| || |||||| Sbjct 21725 CGACGACTTGATCGTGCCAAGGTTCTTTTGGTT-CGATTTCTTGTTTGCG-GCGTCCTTG 21668 Query 66137 TACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA--- 66193 || | |||| |||| ||||||| || || |||| ||| | || |||| |||||| Sbjct 21667 TAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTACCAAAGCTTT 21608 Query 66194 -GCGCGTGCCT--TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250 ||||| | | || | | | | ||||| ||||| ||||| | ||| | ||| Sbjct 21607 TGCGCGGGGATCGTCTTCTTG-GCGCGGCCCT-CCTTT----TCGTATTTCTCGAACAGG 21554 Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310 ||| ||| || | |||||| || | || | | || || | ||| Sbjct 21553 GCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAACAGG 21494 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| || || | || || || ||| || ||||| || |||||||| || || Sbjct 21493 GGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGCAAAG 21434 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 |||||||| || || || ||||| ||||||| || ||||| | ||| ||||||||| Sbjct 21433 AAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCA 21374 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 |||| |||||| ||||| || || |||||||| ||||| | || ||| ||| |||| Sbjct 21373 AAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCA 21314 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 ||||||||||||||||| ||| ||||||| ||||||| | ||| || |||| ||||| Sbjct 21313 CCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTC 21254 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | ||| || |||||| ||||| || || || || || | ||| | ||| | Sbjct 21253 GAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAA 21194 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGC 66668 || ||||||||||| ||||| |||||| ||| | || | | || | | |||| Sbjct 21193 CCGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTGTCGTAGATGC 21136 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728 | || || || ||| |||| || || | ||| |||| || ||| || || | || | Sbjct 21135 CTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCG 21076 Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGT 66788 | |||| |||||| || || | ||||| |||||||| | |||||| |||| Sbjct 21075 TTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGT 21016 Query 66789 ACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGA 66848 ||| || | ||| || |||| | || || || |||| || ||||| || | Sbjct 21015 ACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCA 20956 Query 66849 GGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGG 66908 || ||| || |||||| | | | | | ||| | | || || ||||| || || | Sbjct 20955 TGTGTTGCGGTCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGCG 20896 Query 66909 TCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 |||||| |||||||| ||| ||||||| Sbjct 20895 TCTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 20864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567796494880