Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq128 140 5e-31 seq79 140 5e-31 seq71 140 5e-31 seq40 140 5e-31 seq39 140 5e-31 >seq128 Length=305336 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 299380 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 299437 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 299438 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 299497 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 299498 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 299551 >seq79 Length=30831 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 9730 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 9787 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 9788 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 9847 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 9848 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 9901 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 19703 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 19760 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 19761 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 19820 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 19821 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 19874 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 29676 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 29733 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 29734 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 29793 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 29794 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 29847 >seq71 Length=22528 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 5071 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 5128 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 5129 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 5188 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 5189 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 5242 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 15039 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 15096 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 15097 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 15156 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 15157 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 15210 >seq40 Length=35106 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 9068 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 9125 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 9126 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 9185 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 9186 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 9239 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 19038 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 19095 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 19096 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 19155 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 19156 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 19209 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 29009 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 29066 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 29067 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 29126 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 29127 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 29180 >seq39 Length=26446 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 4397 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 4454 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 4455 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 4514 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 4515 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 4568 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 14363 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 14420 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 14421 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 14480 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 14481 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 14534 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 24328 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 24385 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 24386 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 24445 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 24446 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 24499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198833408