Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15]
2,557 sequences; 57,384,356 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1763 352 5e-95
seq1396 352 5e-95
>seq1763
Length=74396
Score = 352 bits (390), Expect = 5e-95
Identities = 269/314 (86%), Gaps = 3/314 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGG-GTGTGCCGGGGA 64
||| | | ||| ||| ||| ||| || ||| | ||||||| | ||| ||| | ||||||
Sbjct 340 GTCTGACTGGGTCTTACCTCTTGGTGAGCCGGCGTGCCCTTTATTGGTGTGCGTCGGGGA 399
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct 400 ACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACAT 459
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 460 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGT 519
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||| ||||| | ||||| | | | |||||||||||||||||
Sbjct 520 AATGATTAATAGGGATAGTTGGGGGCATTGGTATTGAGTCGCTAGAGGTGAAATTCTTGG 579
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||| | | ||||| ||||||||||||||| || |||||||||||||||||||||| ||
Sbjct 580 ATTGACTCAAGACCAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 638
Query 305 ACGAAAGTTAGGGG 318
||||| ||||||||
Sbjct 639 ACGAAGGTTAGGGG 652
>seq1396
Length=4076
Score = 352 bits (390), Expect = 5e-95
Identities = 269/314 (86%), Gaps = 3/314 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGG-GTGTGCCGGGGA 64
||| | | ||| ||| ||| ||| || ||| | ||||||| | ||| ||| | ||||||
Sbjct 3416 GTCTGACTGGGTCTTACCTCTTGGTGAGCCGGCGTGCCCTTTATTGGTGTGCGTCGGGGA 3475
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct 3476 ACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACAT 3535
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3536 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGT 3595
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||| ||||| | ||||| | | | |||||||||||||||||
Sbjct 3596 AATGATTAATAGGGATAGTTGGGGGCATTGGTATTGAGTCGCTAGAGGTGAAATTCTTGG 3655
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||| | | ||||| ||||||||||||||| || |||||||||||||||||||||| ||
Sbjct 3656 ATTGACTCAAGACCAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 3714
Query 305 ACGAAAGTTAGGGG 318
||||| ||||||||
Sbjct 3715 ACGAAGGTTAGGGG 3728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915176598336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |