Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1763 517 5e-144 >seq1763 Length=74396 Score = 517 bits (572), Expect = 5e-144 Identities = 532/690 (77%), Gaps = 52/690 (8%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||||||| |||||||| | |||||||| Sbjct 2448 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTAAATTCCATCTAAAGC 2507 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||| Sbjct 2508 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTT 2567 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC-- 212 |||||||||||||||| || ||||||||||| |||||||||| |||||| | ||| | Sbjct 2568 TGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTCAGTCGC 2627 Query 213 -TTGCCCGCAGTTGCTCAACCGGCCCCTC--GGCCGGTGCACTCTTCTGCG-GTCAGGCC 268 ||| || || | |||||| | | | || | ||| | ||| | | || | Sbjct 2628 GTTGGCC--AGG-GATCAACCTTGCTTTTTAGTGAGGCGTACT-TCCTGGTTGACGGGTC 2683 Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTT 328 |||||||| | | | | ||| |||||| ||||||||||| | || || ||||| Sbjct 2684 AGCATCAGTTTTGACCGCTGGAGAAAGGCTTGGGGAATGTGGCATC--TCCGGATGTGTT 2741 Query 329 ATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGG---TCCGCGCTCCG--------- 376 |||||| || | || | || | ||||||||| || || | ||| Sbjct 2742 ATAGCCTCTTGTCGTATACAGCG-GTTGGGACTGAGGAACTCAGCACGCCGCAAGGCCGG 2800 Query 377 ------------------GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 ||| ||||||||||| |||||| | |||||| ||||||||| Sbjct 2801 GTTTTTAACCACGTTCGTGCTTAGGATGCTGGCATAATGGCTTTAAGCGACCCGTCTTGA 2860 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct 2861 AACACGGACCAAGGAGTCTAACATGCTTGCGAGTGTTTGGGTGGAAAACCCGAGCGCGTA 2920 Query 478 ATGAAAGTGAACGGAGGTGGGAACCC----GTGAGGGTGCACCATCGACCGATCCTGATG 533 ||||||||||| || ||||| | | ||| ||| ||||| || ||| ||||||| Sbjct 2921 ATGAAAGTGAA---AGTTGGGATCTCTGTCGTG-GGGAGCACCGACGCCCGGACCTGATG 2976 Query 534 TCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGC 593 | | | || |||| || | |||||| |||||||||||||||||||||||||||||| Sbjct 2977 TTTACTGACGGATCTGCGGTAGAGCACGTATGTTGGGACCCGAAAGATGGTGAACTATGC 3036 Query 594 CTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAA 653 ||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| Sbjct 3037 CTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAA 3096 Query 654 ATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| ||||||||||||||||||| Sbjct 3097 ATCGATCGTCGAATTTGGGTATAGGGGCGA 3126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079945152350