Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2416 206 2e-48 seq2123 203 3e-47 seq1573 111 1e-19 >seq2416 Length=74831 Score = 206 bits (228), Expect = 2e-48 Identities = 377/546 (69%), Gaps = 11/546 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||||||||| || ||||| || |||||||| | ||| || | ||| | Sbjct 66695 ATCTGGCAAATGTACAAAAAAGCAGAAGCATCATTCTGGACTGCGGAAGAAATGGATCTA 66754 Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201 ||||||||| || | |||||| | || | || || | || | || ||||| Sbjct 66755 TCCAAAGACTTGCACGACTGGAACAACCGCATGAAT-GA-CAACGAGCGTCACTTCATCT 66812 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 ||||| | || ||||| |||||||| ||||| || || || || || | |||||| Sbjct 66813 CTCATGTCCTCGCTTTCTTCGCCGCTTCAGACGGCATTGTTAACGAAAACCTCGTGGAAC 66872 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||||| | | || || || | | || ||||||||||||||||| |||||||| | Sbjct 66873 GTTTCTCAAATGAAGTTCAGGCCGCCGAAGCGCGTTGTTTCTACGGTTTCCAGATCATGA 66932 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 |||| ||| | || || |||| ||| | |||||||| || ||||||| || | Sbjct 66933 TGGAAAATATTCATTCCGAGACATACTCCCTCCTCATCGACACCTACATCAAAGACCCTC 66992 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 |||| |||| | ||| |||| | || || || || || ||||| || || | Sbjct 66993 GACAACGCGAACACCTCTTCGATGCTGTTGAAACCATTCCTTGTGTCAAGCGTAAGGCTG 67052 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA-CG-GCTACATTTGGTGAACGATTGCTGGC 61499 | ||||| || |||||| | | |||| || | ||||| |||||||| | | || Sbjct 67053 ACTGGGCTCTCCGATGGATCTC--GGACAAGCGTTCAACATTCGGTGAACGCCTTGTCGC 67110 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 ||||| | ||| || || | || ||| || || || ||||| ||||| ||| |||| Sbjct 67111 GTTTGCAGCGGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGCCATCTTCTGGATGAA 67170 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| || || || ||||| || |||||||| ||||||| | || || |||||||| Sbjct 67171 GAAGCGAGGGCTGATGCCTGGCTTGACCTTCTCCAATGAGCTCATCAGCCGTGACGAGGG 67230 Query 61620 CATGCA 61625 |||||| Sbjct 67231 CATGCA 67236 Score = 127 bits (140), Expect = 2e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || ||| | ||||||||||||||||| ||||| | || |||| ||||| || || Sbjct 67401 GATGCTCTCCCCGTCTCACTCATCGGAATGAACGCTAAGCTCATGTGTCAGTACATCGAG 67460 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 |||||||||||||| ||| | || | |||||||| | |||||| || | | ||| Sbjct 67461 TTTGTTGCCGACCGCCTGCTCGTTGCTTTGGGTAACGACAAGATCTACAACAGCACCAAC 67520 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||||||||||||| || | || ||||| || || |||||||| || Sbjct 67521 CCCTTCGACTTCATGGACATGATTTCGTTGCAAGGAAAGACAAACTTCTTCGAGAAGCGA 67580 Query 61918 GTA 61920 ||| Sbjct 67581 GTA 67583 >seq2123 Length=425399 Score = 203 bits (224), Expect = 3e-47 Identities = 385/558 (69%), Gaps = 9/558 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| ||||| || |||||||| | || ||| | ||| || Sbjct 272202 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCATTCTGGACCGCCGAAGAGATGGATCTG 272143 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || || ||| || | |||||| | || | | ||| || | |||||||| Sbjct 272142 TCGAAGGACTTGCACGACTGGAACAACCGCATGAACGAAAAC-GAGCGTCATTTCATCTC 272084 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| || | || ||||| |||||||| || || || ||||| |||||| | | || || Sbjct 272083 ACACGTCCTCGCATTCTTCGCCGCTTCTGATGGGATTGTCAACGAGAATCTCGTCGAGCG 272024 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | | || ||||| | | || ||||| || |||||||| ||||| || || Sbjct 272023 TTTCTCTAATGAAGTGCAGGCTGCTGAAGCGCGGTGCTTCTACGGGTTCCAAATCATGAT 271964 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGG 61381 |||||| | ||||| || | ||| | |||||||| || ||||| | || || | Sbjct 271963 GGAGAACATTCACTCTGAAACATACTCACTCCTCATCGACACCTACATTAAAGATGCTCG 271904 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | |||| |||| | ||| ||||| | || || || || || ||||| || || | Sbjct 271903 CC-AACGGGAACACCTCTTCGATGCCGTTGAAACCATCCCCTGCGTCAAGCGCAAGGCCG 271845 Query 61442 ATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCA 61500 | ||||| |||| || ||||| || |||| | | |||||||| || || | || Sbjct 271844 ACTGGGCTCTTCGAT-GGATCTCCGATACACGCTCGATCTTTGGTGAGCGTCTGGTTGCC 271786 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | ||||||||| | || ||| || ||||| || || || || ||| ||||| Sbjct 271785 TTCGCTGCCGTCGAGGGTATCTTCTTCTCGGGGTCGTTCGCTGCTATTTTCTGGATGAAG 271726 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || ||||| | |||||||| |||| ||| |||||| | || || ||||||||| Sbjct 271725 AAGCGTGGTTTGATGCCCGGATTGACGTTCTCCAATGAACTCATTAGCCGTGACGAGGGC 271666 Query 61621 ATGCATTGTGATTTTGCT 61638 ||||| ||||||||| Sbjct 271665 ATGCACACCGATTTTGCT 271648 Score = 165 bits (182), Expect = 6e-36 Identities = 380/569 (67%), Gaps = 5/569 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || ||||| ||||||||| || ||||| || |||||||| | || || | || || Sbjct 273304 ATATGGCGAATGTACAAACGAGCAGAAGCGTCATTCTGGACTGCCGAAGAAATAGACTTA 273363 Query 61147 TCCAAAGACATGAATGACTGGGAGC---GTTTAT-CGAGCGGTGAACAACATTTCATTAA 61202 || || ||| ||| |||||| | | ||||| ||| | |||||| | ||||| | Sbjct 273364 TCTAACGACTTGATGGACTGGAACCACCGTTTAAACGA-CAGTGAACGATATTTCGTATC 273422 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 | || | || ||||| || || || || || || || || ||||| || | ||||| Sbjct 273423 CCGGGTTCTTGCTTTCTTCGCTGCGTCAGATGGAATAGTGAACGAGAACCTAGTAGAACG 273482 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 || | | |||||||||||| | || ||||| ||||| || || ||||| ||| || Sbjct 273483 GTTTTCAAACGAGGTGCAAGTGGCAGAAGCGCGATGTTTTTATGGTTTCCAAATTATGAT 273542 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || ||||||| ||| ||| | ||||||| || || ||||||| || | | Sbjct 273543 GGAAAACATCCACTCCGAGGCATACTCTCTTCTCATAGACACCTACATCAAAGACCCAAC 273602 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 ||||| || |||| | || || || || || || | ||||| || || Sbjct 273603 CGAACGGCAATATCTGTTTGACGCGATAGAAACCATTCCTTGCATCCGACGGAAGGCTGA 273662 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATT 61502 ||||| || ||||| | || | | | |||| |||||| ||| |||| || Sbjct 273663 CTGGGCAATCCGCTGGATATCGGATAAACAAACATCTTTTGCTGAACGTTTGGTGGCTTT 273722 Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAA 61562 || | ||| ||||| | |||||| || || ||||| | || |||||| | ||||| Sbjct 273723 CGCTGCGGTGGAGGGAATCTTTTTCTCCGGCTCCTTTGCTTCCATATTTTGGATAAAGAA 273782 Query 61563 ACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCAT 61622 || || |||||||| || ||||||| ||| || ||||| || ||||| || | Sbjct 273783 GCGAGGTCTTATGCCAGGACTGACCTATTCCAACGAATTGATCAGTCGTGACGAAGGGTT 273842 Query 61623 GCATTGTGATTTTGCTGTTTTGCTATTCA 61651 ||| || |||||| || |||||| Sbjct 273843 ACATACAGAGTTTGCTAGCCTGTTATTCA 273871 >seq1573 Length=133326 Score = 111 bits (122), Expect = 1e-19 Identities = 87/104 (84%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 || |||||||| |||||||| || || |||||||||||||| ||||||| |||||||| Sbjct 59225 AAGGTGTCGGCGAGACCTTGCACACCGATACCGATGGGACGGTGACGCATGTTGGAACGA 59166 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 | |||||||| ||||| ||||| |||| |||||| ||||| || Sbjct 59165 CGAGCCTCAGGAACAGGATAGTAGTTGACATCGATTATGCGGTT 59122 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/241 (69%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || |||||||| ||||| || |||||||| | || || || || ||||| |||| Sbjct 58606 AAGAGATCAGGGATCCAAAGAGCGTAGAATAAGTCACGGGCACGGACTTCCTCCTTGCCA 58547 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || || | | ||| | ||| | ||||||||||| ||||| || || | || ||| Sbjct 58546 TGGTTCTTCCTAAGGTCAATGAAGGCGAAGATGTCGGCGTGCCACGGCTCAATATACATG 58487 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCG---ACATTGTTG 66520 || || | || ||| ||| ||| |||||||||||||| || ||| ||| | Sbjct 58486 GCAAATGCACCTGGACGCTTGTTGCCTCCTTGGTCGACGTAACGGGCGGTAGCATCAT-- 58429 Query 66521 AAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGAT 66580 ||| | || | ||| || || | || || || | ||||||||| || | ||| |||| Sbjct 58428 AAG-CTCGAAGCATGGGCACTATACCATTTGAGTAGCCATTGGTTCCAGCAATGTAGGAT 58370 Query 66581 C 66581 | Sbjct 58369 C 58369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397555610414480