Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq837 295 1e-77 >seq837 Length=9431 Score = 295 bits (326), Expect = 1e-77 Identities = 205/229 (90%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 2369 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 2312 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 2311 CTCGTTGAAGAGCAAGAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 2252 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| ||| ||||| || | ||||||||||||||||||| Sbjct 2251 ACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 2192 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2191 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751988788385