Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq837 553 7e-155 >seq837 Length=9431 Score = 553 bits (612), Expect = 7e-155 Identities = 537/693 (77%), Gaps = 52/693 (8%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| Sbjct 3363 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 3422 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 3423 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 3482 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||||| || ||||||||||||| |||||||| || ||| | ||| | | Sbjct 3483 TGGAAAGAGAGTTAAACAGTACGTGAAATTGTTAAAAGGGAAACGATTGAAGTCAGTCAT 3542 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATC 274 || | | |||| ||| || | ||||| ||| || | | |||||||||||| Sbjct 3543 GCTTTCCGAGACTCAGCCGAT---TCTGTCGGTGTACTTCTCGGTTGGCAGGCCAGCATC 3599 Query 275 AGCT-CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333 || | || | || ||| || | ||||| ||||| | || || |||||||||| Sbjct 3600 AGTTTCGATCTGT-GGAAAAGGTTGGAGGGAACGTGGCATC--TCCGGATGTGTTATAGC 3656 Query 334 CC-------------------GGG---GTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371 || ||| | |||| || || ||||| | |||| || Sbjct 3657 CCTTCTTCGAATACATAGAGCGGGACTGAGGAACGCAGCGCGCCTTTTATTAGGTTGGCC 3716 Query 372 CTCCGGC-----------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAAC 420 ||| || |||||||||||| |||||| | ||| || ||||||||| ||| Sbjct 3717 CTCGGGTACATACGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGTCTTGAAAC 3776 Query 421 ACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATG 480 ||||||||||||||||||||| | |||||||||||||||| ||||||| |||||||| Sbjct 3777 ACGGACCAAGGAGTCTAACATGTTTGCGAGTGTTTGGGTGGTAAACCCGAACGCGTAATT 3836 Query 481 AAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGG 540 |||||||| | |||||||| || | || |||||||||||||||| ||| | || | Sbjct 3837 AAAGTGAATGCAGGTGGGATCCGC--AAGGAGCACCATCGACCGATCTGGATCTTTTGTG 3894 Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 3895 ATGGATTTGAGTAAGAGCACATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 3954 Query 601 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG----------GCGTG 650 ||| |||||||||||||||||||||||||||||| |||| ||||| |||| Sbjct 3955 GGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAAAAAAAAAAACGTG 4014 Query 651 CAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||||| Sbjct 4015 CAAATCGATCGTCAAATTTGGGTATAGGGGCGA 4047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079966988450