Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq837 697 0.0 >seq837 Length=9431 Score = 697 bits (772), Expect = 0.0 Identities = 470/519 (91%), Gaps = 20/519 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||||||| | ||||||| ||| |||||||||||||||||| Sbjct 1253 GTACTCATTCCAATTATAAGACCCATA-GAGCCCTATATTGTTATTTATTGTCACTACCT 1195 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1194 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1135 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 1134 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 1075 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAG-------AAATTTGAATGAACCATC 233 |||| |||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 1074 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGTTTTTTTTTTTTTGAATGAAGCATC 1015 Query 234 GCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAG----CCCCG 288 |||||| ||||||||||||||||| |||||||||||||||||| |||||| || Sbjct 1014 GCCGGCACAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAAGGAGTGGTTTCCC 955 Query 289 AAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCA 346 | |||||||||||||||||||||||||||||||||| ||||| |||| |||| |||| Sbjct 954 A----CGTTGGTTTTTTATCTAATAAATACACCCCTTCCAGAAGTTGGGGCTTTTAAGCA 899 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGAT 406 ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| || Sbjct 898 TGTATTAGCTCTAGAATTACCACAGTTATCCATGTAGCAAGGTACCATCAAATAAACTAT 839 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGC 465 ||||||||||||||||||||||||||||||| ||| | | ||| |||||||||||||||| Sbjct 838 AACTGATTTAATGAGCCATTCGCAGTTTCACAGTAAAAATTTGTTTATACTTAGACATGC 779 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| Sbjct 778 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510376754944