Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1793 576 6e-162 seq980 286 1e-74 >seq1793 Length=8928 Score = 576 bits (638), Expect = 6e-162 Identities = 537/683 (79%), Gaps = 42/683 (6%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| Sbjct 3541 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 3482 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 3481 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 3422 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||||| || ||||||||||||| |||||||| || ||| | ||| | | Sbjct 3421 TGGAAAGAGAGTTAAACAGTACGTGAAATTGTTAAAAGGGAAACGATTGAAGTCAGTCAT 3362 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATC 274 || | | |||| ||| || | ||||| ||| || | | |||||||||||| Sbjct 3361 GCTTTCCGAGACTCAGCCGAT---TCTGTCGGTGTACTTCTCGGTTGGCAGGCCAGCATC 3305 Query 275 AGCT-CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333 || | || | || ||| || | ||||| ||||| | || || |||||||||| Sbjct 3304 AGTTTCGATCTGT-GGAAAAGGTTGGAGGGAACGTGGCATC--TCCGGATGTGTTATAGC 3248 Query 334 CC-------------------GGG---GTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371 || ||| | |||| || || ||||| | |||| || Sbjct 3247 CCTTCTTCGAATACATAGAGCGGGACTGAGGAACGCAGCGCGCCTTTTATTAGGTTGGCC 3188 Query 372 CTCCGGC-----------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAAC 420 ||| || |||||||||||| |||||| | ||| || ||||||||| ||| Sbjct 3187 CTCGGGTACATACGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGTCTTGAAAC 3128 Query 421 ACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATG 480 ||||||||||||||||||||| | |||||||||||||||| ||||||| |||||||| Sbjct 3127 ACGGACCAAGGAGTCTAACATGTTTGCGAGTGTTTGGGTGGTAAACCCGAACGCGTAATT 3068 Query 481 AAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGG 540 |||||||| | |||||||| || | || |||||||||||||||| ||| | || | Sbjct 3067 AAAGTGAATGCAGGTGGGATCCGC--AAGGAGCACCATCGACCGATCTGGATCTTTTGTG 3010 Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 3009 ATGGATTTGAGTAAGAGCACATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 2950 Query 601 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660 ||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct 2949 GGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATC 2890 Query 661 GTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||| Sbjct 2889 GTCAAATTTGGGTATAGGGGCGA 2867 >seq980 Length=464 Score = 286 bits (316), Expect = 1e-74 Identities = 175/185 (95%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 14 GCCTAGCCGT-GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 |||||||| | || || ||||||||||||||||||| |||||||||||| |||||||||| Sbjct 195 GCCTAGCCTTTGTAAAACTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 136 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 135 GGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGT 76 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| Sbjct 75 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAG 16 Query 193 GGAAG 197 ||||| Sbjct 15 GGAAG 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079957636250