Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05]
1,975 sequences; 27,770,102 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 576 6e-162
seq980 286 1e-74
>seq1793
Length=8928
Score = 576 bits (638), Expect = 6e-162
Identities = 537/683 (79%), Gaps = 42/683 (6%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| ||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||
Sbjct 3541 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 3482
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||
Sbjct 3481 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 3422
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214
|||||||||||||||| || ||||||||||||| |||||||| || ||| | ||| | |
Sbjct 3421 TGGAAAGAGAGTTAAACAGTACGTGAAATTGTTAAAAGGGAAACGATTGAAGTCAGTCAT 3362
Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATC 274
|| | | |||| ||| || | ||||| ||| || | | ||||||||||||
Sbjct 3361 GCTTTCCGAGACTCAGCCGAT---TCTGTCGGTGTACTTCTCGGTTGGCAGGCCAGCATC 3305
Query 275 AGCT-CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333
|| | || | || ||| || | ||||| ||||| | || || ||||||||||
Sbjct 3304 AGTTTCGATCTGT-GGAAAAGGTTGGAGGGAACGTGGCATC--TCCGGATGTGTTATAGC 3248
Query 334 CC-------------------GGG---GTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG 371
|| ||| | |||| || || ||||| | |||| ||
Sbjct 3247 CCTTCTTCGAATACATAGAGCGGGACTGAGGAACGCAGCGCGCCTTTTATTAGGTTGGCC 3188
Query 372 CTCCGGC-----------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAAC 420
||| || |||||||||||| |||||| | ||| || ||||||||| |||
Sbjct 3187 CTCGGGTACATACGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGTCTTGAAAC 3128
Query 421 ACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATG 480
||||||||||||||||||||| | |||||||||||||||| ||||||| ||||||||
Sbjct 3127 ACGGACCAAGGAGTCTAACATGTTTGCGAGTGTTTGGGTGGTAAACCCGAACGCGTAATT 3068
Query 481 AAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGG 540
|||||||| | |||||||| || | || |||||||||||||||| ||| | || |
Sbjct 3067 AAAGTGAATGCAGGTGGGATCCGC--AAGGAGCACCATCGACCGATCTGGATCTTTTGTG 3010
Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 3009 ATGGATTTGAGTAAGAGCACATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 2950
Query 601 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660
||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||
Sbjct 2949 GGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATC 2890
Query 661 GTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||||||
Sbjct 2889 GTCAAATTTGGGTATAGGGGCGA 2867
>seq980
Length=464
Score = 286 bits (316), Expect = 1e-74
Identities = 175/185 (95%), Gaps = 1/185 (1%)
Strand=Plus/Minus
Query 14 GCCTAGCCGT-GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
|||||||| | || || ||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 195 GCCTAGCCTTTGTAAAACTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATG 136
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 135 GGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGT 76
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct 75 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAG 16
Query 193 GGAAG 197
|||||
Sbjct 15 GGAAG 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079957636250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |