Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1793 724 0.0 >seq1793 Length=8928 Score = 724 bits (802), Expect = 0.0 Identities = 472/512 (92%), Gaps = 13/512 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||||||| | ||||||| ||| |||||||||||||||||| Sbjct 5641 GTACTCATTCCAATTATAAGACCCATA-GAGCCCTATATTGTTATTTATTGTCACTACCT 5699 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5700 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5759 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 5760 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 5819 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 5820 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 5879 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAG----CCCCGAAGGGCG 295 ||||||||||||||||| |||||||||||||||||| |||||| || | || Sbjct 5880 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAAGGAGTGGTTTCCCA----CG 5935 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTA 353 |||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||||| Sbjct 5936 TTGGTTTTTTATCTAATAAATACACCCCTTCCAGAAGTTGGGGCTTTTAAGCATGTATTA 5995 Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGAT 413 |||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 5996 GCTCTAGAATTACCACAGTTATCCATGTAGCAAGGTACCATCAAATAAACTATAACTGAT 6055 Query 414 TTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTT 472 |||||||||||||||||||||||| ||| | | ||| ||||||||||||||||||||||| Sbjct 6056 TTAATGAGCCATTCGCAGTTTCACAGTAAAAATTTGTTTATACTTAGACATGCATGGCTT 6115 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||| Sbjct 6116 AATCTTTGAGACAAGCATATGACTACTGGCAG 6147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510370169600