Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq4090 210 4e-52 seq11780 185 2e-44 seq7292 141 2e-31 >seq4090 Length=731 Score = 210 bits (232), Expect = 4e-52 Identities = 253/334 (76%), Gaps = 10/334 (3%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| || |||||| ||| || ||||||| || |||||| Sbjct 123 CCCGATGAGGGGAGTGAAACAGTACCTGAAACCGAATGCTTACAAGCAGTTGGAGCCTCT 182 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA-GCGA 122 | | |||||| |||| ||| |||||||||| | | || ||| | || |||| |||| Sbjct 183 TTAGGGGGTGACAGCGTACCTCTTGCATAATGGGTCAGTGACTTAAT-GT-ACCATGCGA 240 Query 123 GGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGT 181 | ||||| || ||| ||| || || ||||||||| || ||||||||||| |||| Sbjct 241 GCTTAAGCCGTT-AGGTG---TAGGCGCAGCGAAAGCGAGTCTGAACAGGGCGACAGAGT 296 Query 182 -TGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAA 240 ||||| ||||| ||||||| |||||||| || || |||| ||||| ||||||| Sbjct 297 ATGGTGTAT-TAGACCCGAAACCCGGTGATCTAGGCATGACCAGGCTGAAGGTGCGGTAA 355 Query 241 CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGG 300 | || |||||| |||||||| | || |||||||| || |||||||| | | | |||| Sbjct 356 CACGCACTGGAGGGCCGAACCGTTCAATGTTGAAAAATTGTCGGATGAGTTGTGTTTAGG 415 Query 301 GGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||| ||||||||||| || Sbjct 416 GGTGAAAGGCCAATCAAACCGGGAAATAGCTGGT 449 >seq11780 Length=976 Score = 185 bits (204), Expect = 2e-44 Identities = 238/325 (73%), Gaps = 9/325 (3%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||| | ||||||||| || | | Sbjct 415 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAACAGTCGGAGCCTCGTAAGG-G 473 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-CACCAGCGAGGTTAAG 129 |||||||||| ||||||| |||||| | | ||| ||| ||| || ||| || |||| Sbjct 474 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA--CGTTCAGTAGCAAGCTTAAC 531 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | ||| || || || ||||||||| | || |||||| ||||| ||| Sbjct 532 CGAATAGGGC-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTTGCTGGGC 586 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| ||| | |||| ||||| |||||||| ||| || Sbjct 587 GTAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGTACTG 646 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| || |||||||| || |||||| | || ||||||||||||| Sbjct 647 GAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 706 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | || |||| |||||||||| || Sbjct 707 CTAAACAAATCCGGAAATAGCTGGT 731 >seq7292 Length=4016 Score = 141 bits (156), Expect = 2e-31 Identities = 227/324 (70%), Gaps = 9/324 (3%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| ||||||||||||||||| ||| | ||||||| || | |||| | | Sbjct 1340 AGGGGAGTGAAATAGACCCTGAAACCGTATACGTACAAGCAGTGGAAGCCC---GCAAGG 1396 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| | |||| || || |||| Sbjct 1397 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACT-GTCAGTGGCAAGCTTAACC 1455 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || || ||||| |||| |||| || || |||||| ||| |||| Sbjct 1456 GTATAGGGG-----AGGCGAAGGGAAACCGAGTCTGAATAGGGCGCATAGTCTCTGGCAG 1510 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| || | |||||||||| |||||||| || ||| Sbjct 1511 TAGACCCGAAACCGAGTGATCTATCCTTGGCCAGGTTGAAGGTGCGGTAACACGCACTGG 1570 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| | |||| || | |||||| | || |||| ||||||||| Sbjct 1571 AGGACCGAACCCACATCTGTTGCAATAGATGGGGATGAGCTGAGGATAGGAGTGAAAGGC 1630 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 || |||||| ||| |||||| || Sbjct 1631 TAAACAAACTCGGAGATAGCTGGT 1654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972550379520