Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1469 322 2e-85 seq669 228 3e-57 seq12417 129 2e-27 >seq1469 Length=370 Score = 322 bits (356), Expect = 2e-85 Identities = 257/308 (83%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||||||||| |||||| | ||| || ||||||||| ||||||||||||||||||||| Sbjct 48 TAGGATGCTGGCATAATGGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 107 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||| ||||||||||||||||| ||||||| |||||||||||||||||| || || | Sbjct 108 CATGCCTGCGAGTGTTTGGGTGTTAAACCCGAGCGCGTAATGAAAGTGAA---AGTTGAG 164 Query 499 AACCCGTGAGGGTGCACCATCGA---CCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 | ||| | | | | |||||| ||| | || | || ||| | || | | | Sbjct 165 ATCCCTGTCGTGGGGAGCATCGATGCCCGGAGCAGAACTTTTGGGACGCATCCGCGGTTG 224 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 225 AGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 284 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 ||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||| Sbjct 285 AAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCGAATTTGGGTAT 344 Query 676 AGGGGCGA 683 |||||||| Sbjct 345 AGGGGCGA 352 >seq669 Length=632 Score = 228 bits (252), Expect = 3e-57 Identities = 152/169 (90%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| Sbjct 401 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 460 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||| Sbjct 461 TAAATATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTT 520 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||||||||||||||| || ||||||||||| |||||||||| |||||| Sbjct 521 TGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTG 569 >seq12417 Length=2649 Score = 129 bits (142), Expect = 2e-27 Identities = 106/129 (82%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | || || |||||||||||||||||||||| ||||| ||| ||||| ||| | Sbjct 1554 GAGCACATATGCTGTGACCCGAAAGATGGTGAACTATACCTGATCAGGTTGAAGTCAGGG 1495 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | | ||| |||||| ||||||||||||| |||| | ||||||| Sbjct 1494 GAAACCCTGATGGAAGACTGAAGCAGTTCTGACGTGCAAATCGATTGTCAGAATTGGGTA 1435 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 1434 TAGGGGCGA 1426 Score = 118 bits (130), Expect = 4e-24 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| ||| |||||| | | ||||| ||||||| Sbjct 2269 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 2210 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | || |||||||||| ||||||| |||| ||||| ||||||| ||| || | Sbjct 2209 ATAACCACGAAACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGTACTCTGAAT 2150 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 ||||||||||| || |||||||| Sbjct 2149 AGAGAGTTAAATAGTACGTGAAA 2127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079449593000