Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq11779 129 6e-28 seq7292 84.2 2e-14 seq13241 75.2 1e-11 seq1746 75.2 1e-11 >seq11779 Length=1307 Score = 129 bits (142), Expect = 6e-28 Identities = 142/182 (78%), Gaps = 9/182 (5%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || |||||| |||||||| | || ||||||||||||||||| Sbjct 1121 GGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGCGGTAGCCTGCGAAAAGCTACGGG 1180 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGAT-ATATTGGA 125 || ||||| | | | ||||||||||||| ||||||||||| ||||| | | ||||| Sbjct 1181 GAGCTGGCAAACAAGCTTTGATCCGTAGATGTCCGAATGGGGAAACCCACTCCTTTTGGA 1240 Query 126 G-AT--ATATCATAACGC-TAGGC---GTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178 | || ||| | || | ||||| || | ||||||| || ||||||||||||||||| Sbjct 1241 GTATCCATAGCTGAATACATAGGCTATGTGAAGCGAACGCGGTGAACTGAAACATCTAAG 1300 Query 179 TA 180 || Sbjct 1301 TA 1302 >seq7292 Length=4016 Score = 84.2 bits (92), Expect = 2e-14 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||||||| ||| || ||||||| |||||||||| | |||||||||| || Sbjct 883 ACGGTGGATGCCTTGGCGGTCAGAGGCGATGAAGGACGTGGCAGCCTGCGAAAAGTGTCG 942 Query 66 GGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 |||| ||||| | | | |||||||| || ||||||||||| ||||| Sbjct 943 GGGAGCTGGCA-ACAAGCTTTGATCCGGCAATGTCCGAATGGGGAAACCC 991 >seq13241 Length=635 Score = 75.2 bits (82), Expect = 1e-11 Identities = 84/109 (77%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| ||||||||||||||||| | ||||||| |||| |||| Sbjct 413 GGTGGATGCCTTGGCATGTACAGGCGAAGAAGGACGTGGCACGCTGCGATAAGCGTCGGG 354 Query 68 GA-TTG-GCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || ||| | || || |||||||| ||| ||||||||||| ||||| Sbjct 353 GAGTTGTGAGCAAAC--TTTGATCCGGCGATTTCCGAATGGGGAAACCC 307 >seq1746 Length=1261 Score = 75.2 bits (82), Expect = 1e-11 Identities = 84/109 (77%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| ||||||||||||||||| | ||||||| |||| |||| Sbjct 413 GGTGGATGCCTTGGCATGTACAGGCGAAGAAGGACGTGGCACGCTGCGATAAGCGTCGGG 354 Query 68 GA-TTG-GCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || ||| | || || |||||||| ||| ||||||||||| ||||| Sbjct 353 GAGTTGTGAGCAAAC--TTTGATCCGGCGATTTCCGAATGGGGAAACCC 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476681476460