Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq7292 141 1e-31 seq11784 111 2e-22 seq7176 98.7 1e-18 seq363 86.0 9e-15 >seq7292 Length=4016 Score = 141 bits (156), Expect = 1e-31 Identities = 185/252 (73%), Gaps = 7/252 (3%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| |||||||||||||||| || ||||| || |||| | || || ||| Sbjct 2689 TTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 2631 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | |||||||||| ||||||||||| | | | |||||||| | ||||| Sbjct 2630 GTGCTGTGTTTTTGATAAACAGTCGCAGCGGCCAGGTTACTGCGACCCTCTAACGCTCAG 2571 Query 122 -CACGTCGTTCACCA----GCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | || |||| | || ||| | ||||||||||||||||||| |||||||||| Sbjct 2570 TCCCGCACGGGACCACGTCGGAG-GGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGC 2512 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 | | |||||| ||| ||||| | | | |||||| | |||||| |||| | ||| |||| Sbjct 2511 CTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGGATTCTCACCCTGCCTACCAGTGT 2452 Query 237 CGGTTTACGGTA 248 |||||||||||| Sbjct 2451 CGGTTTACGGTA 2440 >seq11784 Length=769 Score = 111 bits (122), Expect = 2e-22 Identities = 177/249 (71%), Gaps = 10/249 (4%) Strand=Plus/Minus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 ||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 693 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 635 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCAC--CACCAGCTCAACAC 124 ||||||||| ||||||||||| || | || ||| ||| |||| ||| | Sbjct 634 GTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACCCTTTCACC--CTCCTGGC 577 Query 125 GTCGTTCA--CCAGC---AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | || | ||| | ||| |||| |||||||||||||| ||| |||||||| Sbjct 576 GCAGGCCAGTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTACGGTACCAATTTGCCGA 517 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| || ||||| | | | |||||||| || ||| | | ||||||||||||| Sbjct 516 GTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCCCACCTGTGTCGG 457 Query 240 TTTACGGTA 248 ||| ||||| Sbjct 456 TTTGCGGTA 448 >seq7176 Length=375 Score = 98.7 bits (108), Expect = 1e-18 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 147 CCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACG 206 |||||| |||||| ||||| | || |||||||| |||||| | | | ||| | | | || Sbjct 369 CCTTCTTCCGAAGGTACGGAGGCAATTTGCCGAGTTCCTTCAGGATACTTCTCTCAAGCG 310 Query 207 CCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 |||| |||| |||||||||||||||||||||||||| |||| Sbjct 309 CCTTGGTATACTCTACCTGACCACCTGTGTCGGTTTCGGGTA 268 >seq363 Length=181 Score = 86.0 bits (94), Expect = 9e-15 Identities = 78/98 (80%), Gaps = 3/98 (3%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTT---ACCGTCTTCG 57 |||| |||||| ||||||||||||||||| || ||||| ||| ||| ||| ||| | Sbjct 71 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGAAGCCGACTTAG 130 Query 58 CACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCT 95 || | ||||||||||| |||||||||||| ||| || Sbjct 131 CAGAGTCCTGTGTTTTTGCTAAACAGTCGCTACCCCCT 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694227385180