Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq12416 304 2e-80 seq149 228 1e-57 seq54 136 7e-30 seq467 105 1e-20 seq5782 75.2 2e-11 seq7292 73.4 7e-11 >seq12416 Length=1322 Score = 304 bits (336), Expect = 2e-80 Identities = 214/243 (88%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 490 GTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 549 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 550 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 608 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 609 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 668 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 |||||||||||||||||| ||||||| | ||| | | | ||||||||||||| Sbjct 669 CCTGTGGTAACTTTTCTGACACCTCTTGTTAAAAACTCCTTAAACCAAAAGGATCGATAG 728 Query 270 GCC 272 ||| Sbjct 729 GCC 731 >seq149 Length=584 Score = 228 bits (252), Expect = 1e-57 Identities = 126/126 (100%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 387 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 328 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 327 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 268 Query 213 GTGGTA 218 |||||| Sbjct 267 GTGGTA 262 >seq54 Length=724 Score = 136 bits (150), Expect = 7e-30 Identities = 77/78 (99%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 218 AACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACT 277 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 593 AACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACT 534 Query 278 TTCATGGTTTGTATTCAC 295 |||||||||||||||||| Sbjct 533 TTCATGGTTTGTATTCAC 516 >seq467 Length=541 Score = 105 bits (116), Expect = 1e-20 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 289 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 348 Query 92 T 92 | Sbjct 349 T 349 >seq5782 Length=713 Score = 75.2 bits (82), Expect = 2e-11 Identities = 118/168 (70%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||||| |||| | |||||||||||||||| || ||| || ||||| Sbjct 166 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGC 107 Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 | || ||| |||| | | || | | |||| || ||||||||||||| | || Sbjct 106 CATACCCTTGGGACCGGCTACAGCCCCAGGATGA---GATGAGCCGACATCGAGGTGCCA 50 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || | | ||||| ||||||| ||||| | | |||| |||||||| Sbjct 49 AACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCC 2 >seq7292 Length=4016 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| || ||||| | || Sbjct 3440 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACC 3381 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||||| | | || | | ||| || ||||||||||||| | |||| | | Sbjct 3380 CTTGGGACCGACTACAGCCCCAGGATGT---GATGAGCCGACATCGAGGTGCCAAACACC 3324 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||| ||||| | | |||| |||||||| | ||| ||||| Sbjct 3323 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTT 3269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854180760960