Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq7292 206 6e-51 seq4090 109 1e-21 seq7733 96.9 8e-18 seq8834 93.3 1e-16 >seq7292 Length=4016 Score = 206 bits (228), Expect = 6e-51 Identities = 297/405 (73%), Gaps = 13/405 (3%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAAC-TTGAC 59 ||||||||| | || ||||||||||||| ||||||||||| | || || ||| ||| Sbjct 2218 CGACTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTGCGCCGATGAACGTTGCG 2159 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCC 118 | |||| |||||| |||||| |||| || |||||| | || |||||||| | Sbjct 2158 CGAGGAAACCTTGGGCTTTCGGCGTGCGGGCTTTTCACCCGCATTATCGTTACTCATGTC 2099 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACA 176 |||||| |||| | || | ||||| || | || | || |||| | || ||| Sbjct 2098 AGCATTCGCACTTCTGAT-ACCTCCAGCATGCC-TCTCGACACACCTTCGCAGGCTTACA 2041 Query 177 CGACGCTCCCCTACCCAAC-CACACAGGTTGCCAC---AGCTTCGGCGGATAACTTAAGC 232 ||||||| ||||| | |||| || ||| | |||||||| | | |||| || Sbjct 2040 GAACGCTCCTCTACCGCGCACACAAAGTGTGCACCCCGAGCTTCGGTGTAGTGCTTA-GC 1982 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| || || || |||| || ||| ||||||||||||||||||| ||||| |||| Sbjct 1981 CCCGTTAAATCTTCCGCGCAGACCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAAGG 1922 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| ||||||||||||||| |||||| || |||||||| ||| ||||| | Sbjct 1921 GTGGCTGCTTCTAAGCCAACCTCCTGGCTGTCTATGCCTTTCCACATCGTTTTCCACTTA 1862 Query 353 GTCAC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | ||| |||| ||| ||||||||| | |||||| ||||||||| Sbjct 1861 G-CACTAACTTGGGGACCTTAGCTGCGGGTCTGGGTTGTTTCCCT 1818 >seq4090 Length=731 Score = 109 bits (120), Expect = 1e-21 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 277 ACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCA 336 |||| ||||| ||||||||||||||| ||||||||||||||||||| | | | ||| Sbjct 731 ACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCA 672 Query 337 CATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 ||| |||||||||| || | |||| ||| ||||||||| | | ||||||||||||| Sbjct 671 CATGCTTTCCCACTTAGACGTGACTTGGGGACCTTAGCTGTAGGTTAGGGCTGTTTCCCT 612 >seq7733 Length=119 Score = 96.9 bits (106), Expect = 8e-18 Identities = 89/113 (79%), Gaps = 5/113 (4%) Strand=Plus/Minus Query 211 AGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTG-----ACC 265 |||||||| | | ||| ||||||| ||||| ||| ||| | | | |||| ||| Sbjct 113 AGCTTCGGTGCACGTCTTGAGCCCCGTTACATCTTCGCCGCAGGAACCCTTGTTTAGACC 54 Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 |||||||| |||||| ||||| ||||||||||||||| |||||||||||||| Sbjct 53 AGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTG 1 >seq8834 Length=110 Score = 93.3 bits (102), Expect = 1e-16 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 ||||||| ||||| || |||| | | ||| || |||||||||||||||| ||||| | Sbjct 5 AGCCCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAA 64 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTG 318 ||| |||||||||| |||||||||||||| Sbjct 65 AGGGTGGCTGCTTCTAAGCCAACCTCCTG 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177297827840