Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq9086 196 5e-48 seq7292 183 3e-44 seq3761 131 2e-28 >seq9086 Length=503 Score = 196 bits (216), Expect = 5e-48 Identities = 137/156 (88%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 488 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 429 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| ||||||||| |||| |||||||||||||||||| | |||||| || Sbjct 428 CTCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCAGCACGATTTC 369 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| |||| |||||||| ||||||||||| Sbjct 368 CGACCGTACCTAGCGTACCTTCGTACTCCTCCGTTA 333 >seq7292 Length=4016 Score = 183 bits (202), Expect = 3e-44 Identities = 134/156 (86%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct 3264 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTACTTTCGTACCTG 3205 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || || ||||| |||||||||||||| ||||||||| |||||| | | ||||||| Sbjct 3204 CTTGATCCGTCGATCTCGCAGTCAAGCACGCTTATGCCTTTGCACACAGTGCGCGATGTC 3145 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | | ||| |||||||||||||||||||| Sbjct 3144 CGACCGCGCTGAGCGTACCTTCGTGCTCCTCCGTTA 3109 >seq3761 Length=760 Score = 131 bits (144), Expect = 2e-28 Identities = 125/158 (79%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | |||||||||||||||||||| |||||| ||| Sbjct 486 GTTGAGCGATGGCCCTTCCACAAGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 545 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCA--CTAACCTCACGATG 141 ||||| ||||| ||||||||||| || ||||||||||||||| ||||| | || | Sbjct 546 CTCGATCCGTCGATCTCGCAGTCAGGCAGGCTTATGCCATTGCACTCTAACAGC-CGGTT 604 Query 142 TCCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||| |||| | ||| ||| ||| || ||||||||| Sbjct 605 TCCAACCGGCCTGAGCCTACCATCGCGCGCCTCCGTTA 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473482271920