Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq11946 196 1e-47 seq7291 185 2e-44 seq11778 179 8e-43 seq140 131 4e-28 seq4062 109 1e-21 >seq11946 Length=1507 Score = 196 bits (216), Expect = 1e-47 Identities = 229/313 (73%), Gaps = 20/313 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||| |||||||| |||||| || Sbjct 1321 GGCTGCTGGCACGGAGTTAGCCGGAGCTTATTCTCCAGGTACTGTCA------------- 1275 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || | ||||| ||||||| ||||||| || || |||||||| |||||| Sbjct 1274 ------TTATCATCCCTGGTAAAAGAGCTTTACAACCCTAAGG-CCTTCATCACTCACGC 1222 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||||| |||| || ||| |||||| |||||||||| |||||||||||||||||| Sbjct 1221 GGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 1162 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | |||||||||| | ||| || Sbjct 1161 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAGGAT 1102 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACA 300 ||| |||| ||| |||| ||||||| || |||||||||| |||| | |||| Sbjct 1101 CGTCGGCTTGGTAGGCCTTTACCCCACCAACTACCTAATCCTACGCGGGCTCATCCCTTG 1042 Query 301 CCGATGAATCTTT 313 ||||| ||||||| Sbjct 1041 CCGATAAATCTTT 1029 >seq7291 Length=1313 Score = 185 bits (204), Expect = 2e-44 Identities = 214/288 (74%), Gaps = 13/288 (5%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCC------ 54 ||||||||||||| ||||||||| ||||||||| | |||||| || | | | Sbjct 756 GGCTGCTGGCACGAAGTTAGCCGGTGCTTATTCCTCAGGTACCGTCAGCCCCACGGGGTA 697 Query 55 ---ACACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT 111 || ||||| | ||| ||| ||||||| ||||||| ||| || ||||| | Sbjct 696 TTAACTCGTGGTA---TTTCGCTCCTGATAAAAGTGCTTTACAACCCGAAGG-CCTTCTT 641 Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171 | ||||| | | ||||| |||| || || |||||| |||||||||| ||||||||| Sbjct 640 CACACACGCGGCATTGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGC 581 Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 ||||||||||||| ||| |||||||||||| ||| ||||| || | |||||||||| | Sbjct 580 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCA 521 Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| | ||||| | || ||| |||| |||||| || |||| ||||| Sbjct 520 GCTAGCGATCGTCGCCTTGGTAGGCCATTACCCTACCAACTAGCTAAT 473 >seq11778 Length=1001 Score = 179 bits (198), Expect = 8e-43 Identities = 213/288 (74%), Gaps = 13/288 (5%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| ||||||||| | ||||| || |||| | | Sbjct 443 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCCGGTACCGTCA---TCCCTCGGCT 387 Query 61 GGA---------AGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT 111 | | ||| ||| || || | ||||| ||||||| ||| || ||||| | Sbjct 386 GTATTAGAGTCAAGGATTTCTTTCCGGACAAAAGTGCTTTACAACCCGAAGG-CCTTCTT 328 Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171 | ||||| | | ||||| |||| || ||| |||||| |||| ||||| ||||||||| Sbjct 327 CACACACGCGGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGC 268 Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 ||||||||||||| ||| |||||||||||| ||| ||||| | | |||||||||| | Sbjct 267 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCA 208 Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| ||||| | || |||||||| ||||||| || |||| ||||| Sbjct 207 GCTACTGATCGTCGCCTTGGTGGGCCTTTACCCCACCAACTAGCTAAT 160 >seq140 Length=1189 Score = 131 bits (144), Expect = 4e-28 Identities = 123/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 157 ATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGAC 216 ||||| |||||||||||||||||||||| ||| |||||||||||| ||| ||||| || Sbjct 1 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGAT 60 Query 217 CTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCT 276 | |||||||||| | ||| ||||| |||| ||| |||| ||||||| || ||||||| Sbjct 61 CGTCCTCTCAGACCAGCTACGGATCGTCGGCTTGGTAGGCCTTTACCCCACCAACTACCT 120 Query 277 AATGGAACGCATCCCCATCGTACACCGATGAATCTTT 313 ||| |||| | |||| ||||| ||||||| Sbjct 121 AATCCTACGCGGGCTCATCCCTTGCCGATAAATCTTT 157 >seq4062 Length=349 Score = 109 bits (120), Expect = 1e-21 Identities = 132/183 (72%), Gaps = 20/183 (11%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||| |||||||| |||||| || Sbjct 187 GGCTGCTGGCACGGAGTTAGCCGGAGCTTATTCTCCAGGTACTGTCA------------- 233 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || | ||||| ||||||| ||||||| || || |||||||| |||||| Sbjct 234 ------TTATCATCCCTGGTAAAAGAGCTTTACAACCCTAAGG-CCTTCATCACTCACGC 286 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||||| |||| || ||| |||||| |||||||||| |||||||||||||||||| Sbjct 287 GGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 346 Query 181 GAG 183 ||| Sbjct 347 GAG 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068525745920