Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq45 304 2e-80
>seq45
Length=7888
Score = 304 bits (336), Expect = 2e-80
Identities = 213/239 (89%), Gaps = 3/239 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| | |||||| ||||||||||| ||| |
Sbjct 1215 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTACTAGGTATT-C 1158
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 1157 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACTGAGTTTCACAAGATT 1098
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||||||||| ||||| || | |||||||||||||||||||
Sbjct 1097 ACCCAGACCTCTCGGCCAAGGTGATAAACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCG 1038
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1037 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGGCTAAA 979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751998899965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |