Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq45 304 2e-80 >seq45 Length=7888 Score = 304 bits (336), Expect = 2e-80 Identities = 213/239 (89%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| | |||||| ||||||||||| ||| | Sbjct 1215 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTACTAGGTATT-C 1158 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 1157 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACTGAGTTTCACAAGATT 1098 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||||||||| ||||| || | ||||||||||||||||||| Sbjct 1097 ACCCAGACCTCTCGGCCAAGGTGATAAACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCG 1038 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 1037 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGGCTAAA 979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998899965