Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq45 372 6e-101 >seq45 Length=7888 Score = 372 bits (412), Expect = 6e-101 Identities = 272/313 (87%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||||||||||| ||| ||| ||| || |||||||||||| |||||||||| | ||| Sbjct 258 GTCCGGCCGGGTCTTACCTCTTGGTGAGGCCGCATGCCCTTTACTGGGTGTGTGGTGGAA 317 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 |||||| |||||| |||| |||||||||||||||||||||||| | || |||||||||| Sbjct 318 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATACGCCCGAATACATT 377 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 378 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 437 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||| |||||||| | ||||||| ||| ||||||||||||||| || Sbjct 438 ATGATTAATAGGGACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 497 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||| |||||||||| || ||||||| ||||||||| |||| ||| Sbjct 498 TTTACGGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 556 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 557 CGAAGGTTAGGGG 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198618048