Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq45 372 6e-101
>seq45
Length=7888
Score = 372 bits (412), Expect = 6e-101
Identities = 272/313 (87%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65
||||||||||| ||| ||| ||| || |||||||||||| |||||||||| | |||
Sbjct 258 GTCCGGCCGGGTCTTACCTCTTGGTGAGGCCGCATGCCCTTTACTGGGTGTGTGGTGGAA 317
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
|||||| |||||| |||| |||||||||||||||||||||||| | || ||||||||||
Sbjct 318 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATACGCCCGAATACATT 377
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 378 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 437
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||| |||||||| | ||||||| ||| ||||||||||||||| ||
Sbjct 438 ATGATTAATAGGGACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 497
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||| |||||||||| || ||||||| ||||||||| |||| |||
Sbjct 498 TTTACGGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 556
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 557 CGAAGGTTAGGGG 569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915198618048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |