Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq45 596 6e-168
>seq45
Length=7888
Score = 596 bits (660), Expect = 6e-168
Identities = 549/691 (79%), Gaps = 39/691 (6%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||||| | | ||| ||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct 2056 TGTGATACACTTTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 2115
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||| ||||||||||||| |||||||||||||| ||||||| |||| ||||||
Sbjct 2116 TCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 2175
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||||||||||||||||| || |||||||||||||||||||||| || ||
Sbjct 2176 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATT 2235
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262
| | ||| | || || | | ||| ||||| | ||||||| | | | || |||
Sbjct 2236 GAAGTCAGTCGTGACCTCTGGAT-TCAGCCGGC---TTTGCCGGTGTATT-TCCTCTGGT 2290
Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322
| || || |||||| | || | | |||||| || |||||| ||||| || || |||
Sbjct 2291 CGGGTCAACATCAGTTTGGACCGATGGATAAGGGTGGCGGGAACGTGGCACC--TCCGGG 2348
Query 323 GGTGTTATAGCCCGGGGT----------------------GGAATGCGGCCCGCCTGGA- 359
||||||||||||| || ||||||| || ||||| |
Sbjct 2349 TGTGTTATAGCCCGCTGTCGCATGCATTGGTCTAGACTGAGGAATGCAGCTCGCCTTTAT 2408
Query 360 --CTGAGGTCCGCGCTC---CG-GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGT 412
| | ||| ||| | | || ||| |||||| || | |||||| | ||| || |||||
Sbjct 2409 GGCCGGGGTTCGCCCACGTTCGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGT 2468
Query 413 CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGC 472
|||| |||||||||||||||||||||||| | |||||||||| ||||||||||||| |||
Sbjct 2469 CTTGAAACACGGACCAAGGAGTCTAACATATCTGCGAGTGTTAGGGTGTCAAACCCCTGC 2528
Query 473 GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGAT 532
|||||||||||||||| | ||| |||| || | || ||||| |||||||||| |||
Sbjct 2529 GCGTAATGAAAGTGAATGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGAT 2586
Query 533 GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATG 592
| || |||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 2587 CTTTTGTGATGGATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATG 2646
Query 593 CCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCA 652
||||||||||| |||||||| ||||||||||||||||||||| |||| ||||| ||||||
Sbjct 2647 CCTGAATAGGGCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCA 2706
Query 653 AATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||||||||||||||
Sbjct 2707 AATCGATCGTCAAATTTGGGTATAGGGGCGA 2737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996761050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |