Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq45 596 6e-168 >seq45 Length=7888 Score = 596 bits (660), Expect = 6e-168 Identities = 549/691 (79%), Gaps = 39/691 (6%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| | | ||| ||||||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 2056 TGTGATACACTTTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 2115 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||| ||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 2116 TCCATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 2175 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || |||||||||||||||||||||| || || Sbjct 2176 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATT 2235 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | | ||| | || || | | ||| ||||| | ||||||| | | | || ||| Sbjct 2236 GAAGTCAGTCGTGACCTCTGGAT-TCAGCCGGC---TTTGCCGGTGTATT-TCCTCTGGT 2290 Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 | || || |||||| | || | | |||||| || |||||| ||||| || || ||| Sbjct 2291 CGGGTCAACATCAGTTTGGACCGATGGATAAGGGTGGCGGGAACGTGGCACC--TCCGGG 2348 Query 323 GGTGTTATAGCCCGGGGT----------------------GGAATGCGGCCCGCCTGGA- 359 ||||||||||||| || ||||||| || ||||| | Sbjct 2349 TGTGTTATAGCCCGCTGTCGCATGCATTGGTCTAGACTGAGGAATGCAGCTCGCCTTTAT 2408 Query 360 --CTGAGGTCCGCGCTC---CG-GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGT 412 | | ||| ||| | | || ||| |||||| || | |||||| | ||| || ||||| Sbjct 2409 GGCCGGGGTTCGCCCACGTTCGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGT 2468 Query 413 CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGC 472 |||| |||||||||||||||||||||||| | |||||||||| ||||||||||||| ||| Sbjct 2469 CTTGAAACACGGACCAAGGAGTCTAACATATCTGCGAGTGTTAGGGTGTCAAACCCCTGC 2528 Query 473 GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGAT 532 |||||||||||||||| | ||| |||| || | || ||||| |||||||||| ||| Sbjct 2529 GCGTAATGAAAGTGAATGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGAT 2586 Query 533 GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATG 592 | || |||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 2587 CTTTTGTGATGGATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATG 2646 Query 593 CCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCA 652 ||||||||||| |||||||| ||||||||||||||||||||| |||| ||||| |||||| Sbjct 2647 CCTGAATAGGGCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCA 2706 Query 653 AATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||| Sbjct 2707 AATCGATCGTCAAATTTGGGTATAGGGGCGA 2737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079996761050