Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq45 462 4e-128
seq58 136 7e-30
>seq45
Length=7888
Score = 462 bits (512), Expect = 4e-128
Identities = 261/264 (99%), Gaps = 0/264 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 4799 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 4740
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4739 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 4680
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4679 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 4620
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 4619 TGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAGGC 4560
Query 272 CACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||
Sbjct 4559 CACACTTTCATGGTTTGTATTCAC 4536
>seq58
Length=2065
Score = 136 bits (150), Expect = 7e-30
Identities = 96/110 (87%), Gaps = 11/110 (10%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
Sbjct 99 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTCCCGT- 41
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAG 140
||| |||||||||||||||||||||||||||||||||||||
Sbjct 40 ---GTG-------AATCCAACGCTTACCGAATTCTGCTTCGGTATGATAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398709856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |