Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq45 461 1e-127 >seq45 Length=7888 Score = 461 bits (510), Expect = 1e-127 Identities = 289/310 (93%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct 905 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTGGCTGGTCGTCGGCTTCTTAG 964 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||| Sbjct 965 AGGGACTGTCGGCGTTTAGCCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1024 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| Sbjct 1025 AGATGTTCTGGGCCGCACGCGCGCTACACTGACTGAGCCAGCGAGTTTATCACCTTGGCC 1084 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 1085 GAGAGGTCTGGGTAATCTTGTGAAACTCAGTCGTGCTGGGGATAGAGCATTGCAATTATT 1144 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | |||| |||| |||||||||||||||||| Sbjct 1145 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCACCAGCTCGCGTTGATTACGTCCCT 1204 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 1205 GCCCTTTGTA 1214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198569728