Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq45 787 0.0
>seq45
Length=7888
Score = 787 bits (872), Expect = 0.0
Identities = 497/537 (93%), Gaps = 3/537 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4504 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 4445
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4444 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 4385
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||| ||||||||||| ||| || ||| || || |||| |||||||||||||
Sbjct 4384 AGCCCGTAAAGGACCTTAAAACCAAAAGGTGGGACGTTAATCCCAGCTCCGCTTCATTGA 4325
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||||||| |||||||||||||||| |||||||| |||||||||||
Sbjct 4324 ATAAGTAAAAAAACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 4268
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||| || ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 4267 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 4208
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4207 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 4148
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4147 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 4088
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4087 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 4028
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 4027 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACACCACTTTCTG 3971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635197530848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |