Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq58 140 5e-31
seq45 140 5e-31
>seq58
Length=2065
Score = 140 bits (154), Expect = 5e-31
Identities = 145/185 (78%), Gaps = 4/185 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| |
Sbjct 127 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 184
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||| ||||||||||||||||||||||||||||||| | | |
Sbjct 185 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 244
Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
||| | |||| | ||| |||| | |||| | | ||||||||||||| |||
Sbjct 245 GAA-ACGATGATGTTGGTCCCGCACGTGTTAGTTGTGTCATAATAGGCTTCGGCTGTGAA 303
Query 180 CCTTA 184
|| ||
Sbjct 304 CCATA 308
>seq45
Length=7888
Score = 140 bits (154), Expect = 5e-31
Identities = 145/185 (78%), Gaps = 4/185 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| |
Sbjct 4829 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 4886
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||| ||||||||||||||||||||||||||||||| | | |
Sbjct 4887 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 4946
Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
||| | |||| | ||| |||| | |||| | | ||||||||||||| |||
Sbjct 4947 GAA-ACGATGATGTTGGTCCCGCACGTGTTAGTTGTGTCATAATAGGCTTCGGCTGTGAA 5005
Query 180 CCTTA 184
|| ||
Sbjct 5006 CCATA 5010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819198801664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |