Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq58 140 5e-31 seq45 140 5e-31 >seq58 Length=2065 Score = 140 bits (154), Expect = 5e-31 Identities = 145/185 (78%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| | Sbjct 127 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 184 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||| ||||||||||||||||||||||||||||||| | | | Sbjct 185 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 244 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| | |||| | ||| |||| | |||| | | ||||||||||||| ||| Sbjct 245 GAA-ACGATGATGTTGGTCCCGCACGTGTTAGTTGTGTCATAATAGGCTTCGGCTGTGAA 303 Query 180 CCTTA 184 || || Sbjct 304 CCATA 308 >seq45 Length=7888 Score = 140 bits (154), Expect = 5e-31 Identities = 145/185 (78%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| | Sbjct 4829 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 4886 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||| ||||||||||||||||||||||||||||||| | | | Sbjct 4887 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 4946 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| | |||| | ||| |||| | |||| | | ||||||||||||| ||| Sbjct 4947 GAA-ACGATGATGTTGGTCCCGCACGTGTTAGTTGTGTCATAATAGGCTTCGGCTGTGAA 5005 Query 180 CCTTA 184 || || Sbjct 5006 CCATA 5010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198801664