Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq45 571 2e-160 >seq45 Length=7888 Score = 571 bits (632), Expect = 2e-160 Identities = 373/407 (92%), Gaps = 3/407 (1%) Strand=Plus/Minus Query 101 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7888 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 7829 Query 161 TACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 7828 TACCCGTTGATACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATT 7769 Query 221 TGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG 280 |||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct 7768 TGAATGAAGCATCGCCGGCGCAAGGCCATGCGATTCGAGAAGTTATCATGAATCACCATA 7709 Query 281 GAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-T 338 || | | ||||||||||||||||||||||||||||| || |||||||||| | Sbjct 7708 AAGGGCTTTCACCCATTGGTTTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCT 7649 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 ||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||| Sbjct 7648 TTTCAGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAA 7589 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTT 457 ||||| ||||||||||||||||||||||||||||||||| |||| | ||| |||||||| Sbjct 7588 TAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACCGTATGAATTTGTTTATACTT 7529 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7528 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 7482 Score = 154 bits (170), Expect = 4e-35 Identities = 94/100 (94%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| ||||||||| |||||||| ||| |||||||||||||||||| Sbjct 100 GTACTCATTCCAATTATAAGACCCAATAGAGCCCTATATTGTTATTTATTGTCACTACCT 41 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 100 |||||||||||||||||||||||||||||||||||||||| Sbjct 40 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397719296