Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq45 571 2e-160
>seq45
Length=7888
Score = 571 bits (632), Expect = 2e-160
Identities = 373/407 (92%), Gaps = 3/407 (1%)
Strand=Plus/Minus
Query 101 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7888 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 7829
Query 161 TACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 7828 TACCCGTTGATACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATT 7769
Query 221 TGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG 280
|||||||| |||||||||| ||||||||||||||||| ||||||| |||||||||||
Sbjct 7768 TGAATGAAGCATCGCCGGCGCAAGGCCATGCGATTCGAGAAGTTATCATGAATCACCATA 7709
Query 281 GAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-T 338
|| | | ||||||||||||||||||||||||||||| || |||||||||| |
Sbjct 7708 AAGGGCTTTCACCCATTGGTTTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCT 7649
Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398
||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||
Sbjct 7648 TTTCAGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAA 7589
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTT 457
||||| ||||||||||||||||||||||||||||||||| |||| | ||| ||||||||
Sbjct 7588 TAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACCGTATGAATTTGTTTATACTT 7529
Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7528 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 7482
Score = 154 bits (170), Expect = 4e-35
Identities = 94/100 (94%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||
Sbjct 100 GTACTCATTCCAATTATAAGACCCAATAGAGCCCTATATTGTTATTTATTGTCACTACCT 41
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 100
||||||||||||||||||||||||||||||||||||||||
Sbjct 40 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397719296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |