Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 194 1e-44 seq24 105 5e-18 >seq1 Length=1646047 Score = 194 bits (214), Expect = 1e-44 Identities = 491/744 (66%), Gaps = 2/744 (0%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 ||||| ||||| || || | ||||||||| || | ||| || || || | ||||| | Sbjct 679297 GGAAGAGCAAGCGAGGCCAAGTTGCAGACTGCGACCTCATCTGGTGCAGAGTACTCAATG 679356 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || | || || || | | |||||| || ||| Sbjct 679357 ATCTCAGTGCATAGGTTGGATGACTTGATCGTCCCGAGGTGCTGTTGGTTGGATTTGGCG 679416 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||| || || ||||| | |||| | || | |||||||| |||| ||| | |||| Sbjct 679417 TTGGCGGCGTCTTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGGATG 679476 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATG 66240 ||| |||||| ||||||| | || | | | |||| | | | ||||| Sbjct 679477 GCGAACCAAAGCTTCTGTGCCTTGATGGT-CTTGCGACCCTTGCCAGCCTTCTCGTAGCT 679535 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 ||||| ||| | || || ||| || ||||| |||| || |||| || Sbjct 679536 CTCGTACAGGCGCTCAAACTCTTCGCCGTGGCAGTCGGAAAGACCGGGGCACTCTGCAGG 679595 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||||| | | ||||||||| || ||| || || ||| || ||||| | ||||| Sbjct 679596 GCACATTAAAGTCCAATCACCGTCAGATTCGACTCGCTTCATGAAAAGATCTGAGATCCA 679655 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 || |||||||| || || || || || ||| || ||||||| || ||||| | ||| Sbjct 679656 CAGTGCGTAGAACAGGTCTCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGAAGGTC 679715 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 |||||| ||||||| ||||||||||| || || ||||| ||||| || | ||| || Sbjct 679716 GAGGAAGTCAAAGACATCGGCATGCCAAGGCTCGAGGTAAATGGCAAATGCACCCGGTCG 679775 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 ||| ||||||||| |||||||| |||||| | |||| | || | ||| || || Sbjct 679776 CTTGTTGCCACCTTGATCGACGTAACGAGCGGTGGCATCGAAGGCTCGGAGCATGGGCAC 679835 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 | ||||| || | |||||| || ||| | ||| || || |||||| || | ||| Sbjct 679836 AATACCGTTGGAGTAGCCATTTGTACCGGCAATGTAAGAGCCCTTTGCCCGGATGTTGTG 679895 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCG 66660 | | ||||| |||||||| || ||||| ||||| |||||| | ||| Sbjct 679896 GATGTGGAGACCGATACCACCTGCGGTCTTGGAGATCTTGGCACAAGTCTTGAGGGTCTC 679955 Query 66661 GAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGG 66720 | | || ||||| || |||||| ||| || | | |||| |||| || | ||| || Sbjct 679956 GTAGATACCGTCGATCGAGTCATCCTGCATTGCGACGAGGAAGCAGGACGACATTTGAGG 680015 Query 66721 TTTGGGTGTGGCGGCCGAGAAGAG 66744 | ||||| |||| |||||| Sbjct 680016 GTGAGGTGTACCGGCGTTGAAGAG 680039 >seq24 Length=290538 Score = 105 bits (116), Expect = 5e-18 Identities = 210/304 (69%), Gaps = 14/304 (5%) Strand=Plus/Plus Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA----GC 61378 ||| || ||||||| |||| ||| | | || || || |||||||||| || || Sbjct 18856 GGAAAACATCCACTCTGAGACCTACTCTCTCCTGATTGACACGTACATCAAAGATGCCGC 18915 Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 || |||| | || | ||| | |||||||| || || || | | ||| | Sbjct 18916 CCGCCGAACAT--ACC--TATTCGAAGCCATCGACACTATCCCATGTATCCAAAAGAAGG 18971 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGG-CTACATTTGGTGAACGATTGCTG 61497 | | ||||| |||| |||||| | | ||||| | ||||||| ||| |||||| | Sbjct 18972 CCAACTGGGCACTCAAGTGGATCTCT-GACCAACGATCCACATTTGCTGAGCGATTGATC 19030 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATT--TTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 || ||||| | || |||||| | || |||||| |||| ||||| | ||||| ||| Sbjct 19031 GCCTTTGCCGCTGTAGAGGGTATCTTCTTTTCAG--GATCATTTGCGTCCATCTTCTGGC 19088 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 | |||||||| ||||| ||||||||||| || ||| || ||| | || || || |||| Sbjct 19089 TCAAGAAACGAGGACTCATGCCCGGTCTTACATTCTCAAACGAGCTCATCTCGCGAGACG 19148 Query 61616 AGGG 61619 |||| Sbjct 19149 AGGG 19152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567268350640