Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq134 376 1e-101 seq251 244 4e-62 seq210 217 6e-54 >seq134 Length=607 Score = 376 bits (416), Expect = 1e-101 Identities = 267/305 (88%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||| || | |||||| | ||| || ||||||||| ||||||||||||||||||||| Sbjct 580 TAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 521 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||| | ||||||| ||||||||||||||||| | ||| |||||||||||||| ||| | | Sbjct 520 CATATCTGCGAGTATTTGGGTGTCAAACCCGAGTGCGCAATGAAAGTGAACGTAGGAGCG 461 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || | |||||| | |||||||||| ||| | | ||||||||||||||||||| Sbjct 460 ATCCGC--AAGGTGCAGCTTCGACCGATCTGGATCTTTAGTGATGGATTTGAGTAAGAGC 403 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 402 ATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 343 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| Sbjct 342 CTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 283 Query 679 GGCGA 683 ||||| Sbjct 282 GGCGA 278 >seq251 Length=302 Score = 244 bits (270), Expect = 4e-62 Identities = 161/178 (90%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 255 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 196 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 195 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 136 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || Sbjct 135 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGC 78 >seq210 Length=355 Score = 217 bits (240), Expect = 6e-54 Identities = 269/361 (75%), Gaps = 13/361 (4%) Strand=Plus/Minus Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAAT 183 ||||| |||| |||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 355 AAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAAT 296 Query 184 TGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGC 243 |||||||||||||| || | | ||||| || ||| | | || ||| | Sbjct 295 TGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTG 238 Query 244 CG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCC 298 | | | | ||| | ||| |||||||||||| | || || ||||||| || Sbjct 237 GGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CC 180 Query 299 CCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGG 358 ||||||| || | |||| || |||||||| | || |||| | ||| || || Sbjct 179 ATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGG 122 Query 359 ACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTG 416 ||||||| | ||| | | | ||||||||||| |||||||| || || |||||||||| Sbjct 121 ACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTG 62 Query 417 GAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGT 476 |||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||| Sbjct 61 AAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGT 2 Query 477 A 477 | Sbjct 1 A 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079992771350