Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq140 277 3e-72 seq188 129 9e-28 >seq140 Length=577 Score = 277 bits (306), Expect = 3e-72 Identities = 201/230 (87%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 32 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTG 91 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 GCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTT 60 Query 92 GAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAACCATAGTCGATGGGGCTATTTA 148 ||| || ||||||||||||||||| | ||| ||| || | | ||||||| Sbjct 61 GAAACCGATAGTCCCTCTAAGAAGTGGATAACCAGCAA--ATGCTAGCACCA-CTATTTA 117 Query 149 GCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGA 208 | |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 118 GTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGA 177 Query 209 ACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 178 ACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 227 >seq188 Length=396 Score = 129 bits (142), Expect = 9e-28 Identities = 74/76 (97%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 76 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 17 Query 62 CCTGTTATTGCCTCAA 77 |||||||||||||||| Sbjct 16 CCTGTTATTGCCTCAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797398697