Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq188 347 2e-93 seq140 156 8e-36 >seq188 Length=396 Score = 347 bits (384), Expect = 2e-93 Identities = 209/220 (95%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 60 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG 228 ||| |||||| |||||| || |||||||||| ||||||||||||||||||| |||||| | Sbjct 61 GACTGAGCCAGCGAGTTTATAACCTTGGCCGAAAGGTCTGGGTAATCTTGTGAAACTCAG 120 Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 180 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||| ||||||||||||||||||||||||||| Sbjct 181 AAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 220 >seq140 Length=577 Score = 156 bits (172), Expect = 8e-36 Identities = 117/136 (86%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 136 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 77 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 76 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 17 Query 139 AGATGTTCTGGGCCGC 154 ||| |||||||||||| Sbjct 16 AGACGTTCTGGGCCGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947196807936