Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq244 399 7e-109 seq121 307 3e-81 >seq244 Length=305 Score = 399 bits (442), Expect = 7e-109 Identities = 272/301 (90%), Gaps = 6/301 (2%) Strand=Plus/Plus Query 137 GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaa 195 ||||||| || || |||| ||| |||| |||| ||||||||||||| |||||||| Sbjct 9 GGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCATTGAATAAGTAAA 68 Query 196 aaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA-C 254 |||| |||| ||||||||||||||||| |||||||| |||||||||||||||||| | Sbjct 69 GAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTTATTCTACACC 125 Query 255 CTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 314 |||| | ||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 126 CTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 184 Query 315 CTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 374 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 185 CTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 244 Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 304 Query 435 T 435 | Sbjct 305 T 305 >seq121 Length=674 Score = 307 bits (340), Expect = 3e-81 Identities = 213/241 (88%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 437 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 496 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 497 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 556 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||| ||||||||||| |||| || ||| || || |||| ||||||||||||| Sbjct 557 AGCCCGTAAAGGACCTTAAAGCCAAAAGGTGGGACGTTAATCCCAGCTCCGCTTCATTGA 616 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 617 ATAAGTAAAAAAACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 673 Query 247 T 247 | Sbjct 674 T 674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635194489376