Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq129 134 1e-26 >seq129 Length=301134 Score = 134 bits (148), Expect = 1e-26 Identities = 240/347 (69%), Gaps = 4/347 (1%) Strand=Plus/Minus Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||||||||| | |||| | || ||||| ||| || | || ||||||||| | Sbjct 26618 GCATCCTTGTAGAGCATGAATGGTCCACCGGTTTCAGTCTGTGCATCCATGATGGCGAAC 26559 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTA 66246 ||||| | ||||| | | | | | || |||| |||||||| | |||||| Sbjct 26558 CAAAGCTTTTGCGCCTTGAT-GACCCTCTTGAACTTGCCTTCACGTTCGTACTTTTCGTA 26500 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACAT 66306 | | ||||| | | || ||||||||||||| ||||||| || || ||||| Sbjct 26499 TAATTCGTCGAAAGCCTTGCCGTGGACTTCGGACAGACCCGGACACTCGTTGGGGCACAT 26440 Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 || || ||| || || ||| || ||||| ||||| || | || || |||||||| || Sbjct 26439 CAACGCCCAGTCGCCGTCCGCCTCGACACGTCGCATGAACATGTCGGGGATCCAGAGCGC 26380 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAA 66426 |||||| || || || ||||| || || ||||||| || || || | |||| ||| Sbjct 26379 GTAGAACAGGTCTCGGGCTCGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGATCGATGAA 26320 Query 66427 CTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG--GCGAACGA 66471 || |||| || || ||||| ||||| ||||||||| ||||| || Sbjct 26319 GTCGAAGACATCCGCGTGCCAGGGTTCGAGGTAGATGCTGCGAAAGA 26273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566367113680