Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq70 192 5e-44 seq37 111 1e-19 >seq70 Length=136885 Score = 192 bits (212), Expect = 5e-44 Identities = 391/577 (68%), Gaps = 9/577 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTT- 61145 || |||||| | ||||| || || ||||| || |||||||| | |||||| |||| | Sbjct 73761 ATCTGGCGCTTCTACAAGAAAGCCGAAGCATCATTCTGGACAGCTGAGGAGATCGACCTC 73702 Query 61146 -GTCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATT 61200 ||| | ||| | ||||||||| | | | ||| | || | | |||| || Sbjct 73701 AGTC--ACGACCTCTGGGACTGGGAGAACCGGCTGAACGA-CAACGAGCGATATTTTATC 73645 Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || || | || || || ||||| |||||||| |||||||| ||||| | | || Sbjct 73644 TCGCACGTCCTCGCCTTTTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCTCCTCGAG 73585 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 || ||| | | |||||||| || | |||||||| |||||||||||||||||||| Sbjct 73584 CGGTTCTCCAACGAGGTGCAGGTCGCCGAGGCGCGGTGTTTCTACGGCTTCCAGATCATG 73525 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| ||||||| |||| ||| | |||||||| || ||||||| ||||| | Sbjct 73524 ATGGAGAACATCCACTCCGAGACGTATTCGCTCCTCATCGACACCTACATCAAGGAGCCG 73465 Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 | || || | ||||| | || |||||||| | ||| | ||| ||| ||| Sbjct 73464 CATGTGCGCGAGCACCTGTTCGACGCGATCGAGACCGTGCCGTGCATCAAGAAGAAGGCG 73405 Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCA 61500 || ||||| | |||||| | | || | | || ||| || || | | || Sbjct 73404 GACTGGGCGCTGCGCTGGATCGCGGACAAAAAGTCGACGTTTACGGAGCGGCTTGTTGCG 73345 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | |||||| || | || ||| || ||||| || | ||||| ||| | ||| Sbjct 73344 TTCGCCGCGGTCGAAGGCATTTTCTTCTCCGGCTCGTTCGCGTCGATCTTCTGGCTCAAG 73285 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || ||||| ||||||||||| ||||| ||| || ||| | || ||||| ||||| Sbjct 73284 AAGCGTGGTCTTATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGCGATGAGGGT 73225 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT 61657 ||||| || ||||| | |||| ||| ||| || Sbjct 73224 ATGCACACCGACTTTGCATGTCTGCTGTTCCAACACT 73188 Score = 190 bits (210), Expect = 2e-43 Identities = 372/544 (68%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | || | Sbjct 75277 ATCTGGCAGATGTACAAGAAGGCTGAGGCGTCGTTCTGGACCGCAGAGGAGATGGACCTA 75336 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| || |||||||| | ||| | | ||| || || | || ||||| Sbjct 75337 TCCAAGGACCTGCATGACTGGCACAACCGTCTGAACGA-CGACGAGCGCCACTTCATCTC 75395 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || || || || || || ||||| || |||||||||||| | | || || Sbjct 75396 GCACGTCCTCGCCTTTTTCGCTGCGTCCGACGGCATTGTCAATGAGAATCTCGTCGAGCG 75455 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | | || || || || | ||||| || || ||||||||||||||||| || Sbjct 75456 GTTCTCCAACGAAGTACAGGTTGCTGAGGCACGGTGCTTCTACGGCTTCCAGATCATGAT 75515 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| |||| | |||||||| || || |||| ||| | | Sbjct 75516 GGAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTATATCAAGGACCCCAC 75575 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | | ||||| | |||| | || ||||| || || || | ||| ||| ||||| Sbjct 75576 GCAGCGTGAGCACCTGTTTGACGCGATCGACACCATCCCCTGCATCAAGAAGAAGGCGGA 75635 Query 61443 TTGGGCCTTCAATTGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501 |||||| || ||||||| | | | || || | || | || || | | || | Sbjct 75636 CTGGGCCCTCCGTTGGATCTCGGACAAGAAATCCT-CGTTCGCCGAGCGTCTTATTGCCT 75694 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || | |||||||||| | || ||| ||| ||||| || | ||||| ||| | |||| Sbjct 75695 TCGCAGCGGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCGATCTTCTGGCTCAAGA 75754 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | || || || |||||||| ||||| ||| || ||| | || || || ||||| | Sbjct 75755 AGCGCGGTCTCATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGTGATGAGGGTA 75814 Query 61622 TGCA 61625 |||| Sbjct 75815 TGCA 75818 Score = 95.1 bits (104), Expect = 1e-14 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 61745 TGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTG 61804 ||||||| |||||||||||||||| || |||| ||||| || || || || | Sbjct 73047 TGCCCGTTGCACTCATCGGCATGAACGCCCCGCTGATGTGCCAGTACATCGAGTTCGTCG 72988 Query 61805 CCGACCGTCTGTTGGTC-GATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTT 61863 | ||||| || ||||| | ||| | ||| | | ||| || | | |||||||| Sbjct 72987 CGGACCGCCTCCTGGTCTCGCTCGGGAACGAAAAGCA-CTACAACGCCACGAACCCATTC 72929 Query 61864 GATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 || ||||||||| ||||||| ||| | |||||||| ||||| |||||||| || || Sbjct 72928 GACTTCATGGACCTGATTTCACTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGT 72873 >seq37 Length=175141 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || || || || ||||| | || ||||||||||| || || || |||||| | || Sbjct 162050 AAGAGGTCCGGAATCCACAAAGCATAGAAGAGATCACGAGCACGGACCTCCTCCTTACCA 162109 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || || | || ||||| |||||| |||| ||||||||||| ||||| | ||||||| Sbjct 162110 TGGTTCTTTCTCAGGTCGATGAACTCGAAGACATCGGCATGCCACGGTTCGATGTAGATG 162169 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 || || | || || ||| |||||| || |||||||| ||||| || | | Sbjct 162170 GCAAAAGCTCCAGGGCGCTTGTTGCCACCCTGATCGACGTATCGAGCAGTTGCGTCGTAC 162229 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 |||| | ||| || || | ||||| || | ||| || |||||| | ||| Sbjct 162230 GCACGGAGCATAGGGACAATGCCGTTCGAGTAGCCGTTCGTGCCGGCAATG 162280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564550103680