Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2 565 1e-158 >seq2 Length=9042 Score = 565 bits (626), Expect = 1e-158 Identities = 540/691 (78%), Gaps = 54/691 (8%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||||||||||||||||||||||||||||||| || |||| |||||||| | ||||| || Sbjct 5355 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAATTGGGTGGTAAATTCCATCTAAGGC 5414 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 5415 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 5474 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | | Sbjct 5475 TGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCAT 5534 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGC--GGT----CAGGCC 268 || || |||| | || ||| || || ||| | | ||| |||| | Sbjct 5535 GCGTGCTCGGACTCAGCTGGGT--TCGTCC----CAGTCTATTTCCGGGTGCCGCAGGTC 5588 Query 269 AGCATCAGCT-CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 |||||||| | |||||||| ||| || || | ||||| ||||| | || || |||| Sbjct 5589 AGCATCAGTTTCGGGCGGT-GGAAAACGGGCGGGGGAAGGTGGCATC--TCCGGATGTGT 5645 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG---------------- 371 |||||||| | | | |||| | || ||||||||| ||| Sbjct 5646 TATAGCCCCCGTTTGGATGCATCGCGTG-GGACTGAGGAACGCAGCGCGCCTCTTTACGG 5704 Query 372 -------CTCCGGC------------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGT 412 |||||| |||||||||||| |||||| | ||| || ||||| Sbjct 5705 GGTCGGTCTCCGGACACGAACGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGT 5764 Query 413 CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGC 472 |||| |||||||||||||||||||||||| | ||||||| |||||||| |||||||| | Sbjct 5765 CTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTATTTGGGTGGCAAACCCGAGT 5824 Query 473 GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGAT 532 ||| ||||||||| || | |||||||| || | || |||||||||||||||| ||| Sbjct 5825 GCGGAATGAAAGTAAATGCAGGTGGGATCCGC--AAGGAGCACCATCGACCGATCTGGAT 5882 Query 533 GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATG 592 | || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5883 CTTTTGTGATGGATTTGAGTAAGAGCATATATGTTGGGACCCGAAAGATGGTGAACTATG 5942 Query 593 CCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCA 652 ||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct 5943 CCTGAATAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCA 6002 Query 653 AATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||| Sbjct 6003 AATCGATCGTCAAATTTGGGTATAGGGGCGA 6033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079992599750